Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.83□□□□□ -0.04
PCNAP12004 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PCNAP12004 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.83□□□□□ -0.04
PCNAP12004 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCNAP12004 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCNAP12004 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.83□□□□□ -0.04
PCNAP12004 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.83□□□□□ -0.04
PCNAP12004 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.83□□□□□ -0.04
PCNAP12004 GNAQP1-201ENST00000444815 1067 ntBASIC14.83□□□□□ -0.04
PCNAP12004 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.83□□□□□ -0.04
PCNAP12004 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCNAP12004 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.83□□□□□ -0.04
PCNAP12004 AC023310.3-201ENST00000557027 670 ntBASIC14.83□□□□□ -0.04
PCNAP12004 AC100756.1-201ENST00000562736 682 ntBASIC14.83□□□□□ -0.04
PCNAP12004 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.83□□□□□ -0.04
PCNAP12004 AC138749.3-201ENST00000567691 622 ntBASIC14.83□□□□□ -0.04
PCNAP12004 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
PCNAP12004 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCNAP12004 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.83□□□□□ -0.04
PCNAP12004 AC116165.1-201ENST00000611806 668 ntBASIC14.83□□□□□ -0.04
PCNAP12004 AC004790.1-201ENST00000612686 536 ntBASIC14.83□□□□□ -0.04
PCNAP12004 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.83□□□□□ -0.04
PCNAP12004 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.83□□□□□ -0.04
PCNAP12004 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCNAP12004 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCNAP12004 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCNAP12004 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCNAP12004 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.83□□□□□ -0.04
PCNAP12004 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PCNAP12004 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCNAP12004 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCNAP12004 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PCNAP12004 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PCNAP12004 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PCNAP12004 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PCNAP12004 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCNAP12004 AP000845.1-201ENST00000581677 2131 ntBASIC14.83□□□□□ -0.04
PCNAP12004 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.83□□□□□ -0.04
PCNAP12004 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCNAP12004 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.83□□□□□ -0.04
PCNAP12004 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.82□□□□□ -0.04
PCNAP12004 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCNAP12004 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
PCNAP12004 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCNAP12004 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCNAP12004 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCNAP12004 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCNAP12004 AC005840.4-201ENST00000541242 2494 ntBASIC14.82□□□□□ -0.04
PCNAP12004 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCNAP12004 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCNAP12004 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCNAP12004 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCNAP12004 MIR770-201ENST00000390219 98 ntBASIC14.82□□□□□ -0.04
PCNAP12004 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCNAP12004 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.82□□□□□ -0.04
PCNAP12004 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.82□□□□□ -0.04
PCNAP12004 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.82□□□□□ -0.04
PCNAP12004 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCNAP12004 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCNAP12004 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.82□□□□□ -0.04
PCNAP12004 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.82□□□□□ -0.04
PCNAP12004 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCNAP12004 LINC01230-201ENST00000625222 3017 ntBASIC14.82□□□□□ -0.04
PCNAP12004 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCNAP12004 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCNAP12004 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCNAP12004 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
PCNAP12004 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.82□□□□□ -0.04
PCNAP12004 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.82□□□□□ -0.04
PCNAP12004 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCNAP12004 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCNAP12004 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.82□□□□□ -0.04
PCNAP12004 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCNAP12004 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.82□□□□□ -0.04
PCNAP12004 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCNAP12004 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCNAP12004 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCNAP12004 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCNAP12004 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCNAP12004 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.82□□□□□ -0.04
PCNAP12004 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PCNAP12004 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
PCNAP12004 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCNAP12004 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCNAP12004 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCNAP12004 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.81□□□□□ -0.04
PCNAP12004 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCNAP12004 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PCNAP12004 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PCNAP12004 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PCNAP12004 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PCNAP12004 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCNAP12004 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCNAP12004 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCNAP12004 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.81□□□□□ -0.04
PCNAP12004 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCNAP12004 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.81□□□□□ -0.04
PCNAP12004 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCNAP12004 UGT1A2P-201ENST00000454886 866 ntBASIC14.81□□□□□ -0.04
PCNAP12004 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms