Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM1P09493 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM1P09493 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC16.76■□□□□ 0.27
TPM1P09493 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.76■□□□□ 0.27
TPM1P09493 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM1P09493 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TPM1P09493 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM1P09493 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM1P09493 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM1P09493 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TPM1P09493 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TPM1P09493 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.76■□□□□ 0.27
TPM1P09493 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM1P09493 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM1P09493 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC16.75■□□□□ 0.27
TPM1P09493 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TPM1P09493 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM1P09493 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM1P09493 RET-205ENST00000615310 4337 ntTSL 5 BASIC16.75■□□□□ 0.27
TPM1P09493 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TPM1P09493 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC16.75■□□□□ 0.27
TPM1P09493 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TPM1P09493 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM1P09493 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM1P09493 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TPM1P09493 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM1P09493 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TPM1P09493 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TPM1P09493 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM1P09493 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC16.75■□□□□ 0.27
TPM1P09493 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM1P09493 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TPM1P09493 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM1P09493 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TPM1P09493 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.75■□□□□ 0.27
TPM1P09493 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TPM1P09493 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.75■□□□□ 0.27
TPM1P09493 SERBP1P3-201ENST00000459980 809 ntBASIC16.75■□□□□ 0.27
TPM1P09493 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TPM1P09493 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.75■□□□□ 0.27
TPM1P09493 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.75■□□□□ 0.27
TPM1P09493 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.75■□□□□ 0.27
TPM1P09493 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TPM1P09493 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.75■□□□□ 0.27
TPM1P09493 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.75■□□□□ 0.27
TPM1P09493 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
TPM1P09493 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TPM1P09493 AC007967.4-201ENST00000614700 386 ntBASIC16.75■□□□□ 0.27
TPM1P09493 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TPM1P09493 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TPM1P09493 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TPM1P09493 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM1P09493 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TPM1P09493 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM1P09493 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM1P09493 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
TPM1P09493 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM1P09493 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
TPM1P09493 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.75■□□□□ 0.27
TPM1P09493 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM1P09493 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM1P09493 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.74■□□□□ 0.27
TPM1P09493 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TPM1P09493 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TPM1P09493 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC16.74■□□□□ 0.27
TPM1P09493 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TPM1P09493 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TPM1P09493 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TPM1P09493 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TPM1P09493 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TPM1P09493 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.74■□□□□ 0.27
TPM1P09493 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TPM1P09493 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TPM1P09493 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.74■□□□□ 0.27
TPM1P09493 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TPM1P09493 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TPM1P09493 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.74■□□□□ 0.27
TPM1P09493 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.74■□□□□ 0.27
TPM1P09493 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.74■□□□□ 0.27
TPM1P09493 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TPM1P09493 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TPM1P09493 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
TPM1P09493 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.74■□□□□ 0.27
TPM1P09493 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC16.74■□□□□ 0.27
TPM1P09493 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
TPM1P09493 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TPM1P09493 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TPM1P09493 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TPM1P09493 APP-205ENST00000358918 2366 ntTSL 5 BASIC16.74■□□□□ 0.27
TPM1P09493 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TPM1P09493 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC16.74■□□□□ 0.27
TPM1P09493 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
TPM1P09493 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.74■□□□□ 0.27
TPM1P09493 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TPM1P09493 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TPM1P09493 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TPM1P09493 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TPM1P09493 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TPM1P09493 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TPM1P09493 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 494.5 ms