Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
CXCL1P09341 PMS2P7-201ENST00000506558 1336 ntBASIC11.78□□□□□ -0.52
CXCL1P09341 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CXCL1P09341 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CXCL1P09341 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC11.78□□□□□ -0.52
CXCL1P09341 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
CXCL1P09341 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
CXCL1P09341 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CXCL1P09341 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CXCL1P09341 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CXCL1P09341 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC11.78□□□□□ -0.52
CXCL1P09341 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC11.78□□□□□ -0.52
CXCL1P09341 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC11.78□□□□□ -0.52
CXCL1P09341 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
CXCL1P09341 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.52
CXCL1P09341 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
CXCL1P09341 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC11.77□□□□□ -0.52
CXCL1P09341 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
CXCL1P09341 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
CXCL1P09341 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
CXCL1P09341 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC11.77□□□□□ -0.52
CXCL1P09341 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
CXCL1P09341 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
CXCL1P09341 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CXCL1P09341 ABR-205ENST00000544583 5595 ntTSL 2 BASIC11.77□□□□□ -0.52
CXCL1P09341 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CXCL1P09341 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CXCL1P09341 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
CXCL1P09341 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC11.77□□□□□ -0.52
CXCL1P09341 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC11.77□□□□□ -0.52
CXCL1P09341 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC11.77□□□□□ -0.52
CXCL1P09341 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
CXCL1P09341 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CXCL1P09341 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
CXCL1P09341 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
CXCL1P09341 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
CXCL1P09341 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CXCL1P09341 DFFB-203ENST00000341385 572 ntTSL 5 BASIC11.77□□□□□ -0.53
CXCL1P09341 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC11.77□□□□□ -0.53
CXCL1P09341 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CXCL1P09341 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CXCL1P09341 GPX1P2-201ENST00000429271 606 ntBASIC11.77□□□□□ -0.53
CXCL1P09341 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC11.77□□□□□ -0.53
CXCL1P09341 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC11.77□□□□□ -0.53
CXCL1P09341 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC11.77□□□□□ -0.53
CXCL1P09341 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC11.77□□□□□ -0.53
CXCL1P09341 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CXCL1P09341 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC11.77□□□□□ -0.53
CXCL1P09341 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC11.77□□□□□ -0.53
CXCL1P09341 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC11.77□□□□□ -0.53
CXCL1P09341 AC091304.2-201ENST00000564639 760 ntBASIC11.77□□□□□ -0.53
CXCL1P09341 PAM16-208ENST00000573553 722 ntTSL 2 BASIC11.77□□□□□ -0.53
CXCL1P09341 MIR3652-201ENST00000579335 131 ntBASIC11.77□□□□□ -0.53
CXCL1P09341 FHL2-212ENST00000607522 759 ntTSL 2 BASIC11.77□□□□□ -0.53
CXCL1P09341 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC11.77□□□□□ -0.53
CXCL1P09341 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC11.77□□□□□ -0.53
CXCL1P09341 AL358472.4-201ENST00000633140 710 ntBASIC11.77□□□□□ -0.53
CXCL1P09341 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CXCL1P09341 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
CXCL1P09341 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC11.77□□□□□ -0.53
CXCL1P09341 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
CXCL1P09341 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC11.77□□□□□ -0.53
CXCL1P09341 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC11.77□□□□□ -0.53
CXCL1P09341 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
CXCL1P09341 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CXCL1P09341 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CXCL1P09341 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CXCL1P09341 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CXCL1P09341 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CXCL1P09341 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CXCL1P09341 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
CXCL1P09341 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
CXCL1P09341 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
CXCL1P09341 CETP-203ENST00000566128 1733 ntTSL 5 BASIC11.77□□□□□ -0.53
CXCL1P09341 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
CXCL1P09341 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CXCL1P09341 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
CXCL1P09341 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CXCL1P09341 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
CXCL1P09341 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
CXCL1P09341 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CXCL1P09341 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC11.77□□□□□ -0.53
CXCL1P09341 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC11.76□□□□□ -0.53
CXCL1P09341 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CXCL1P09341 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC11.76□□□□□ -0.53
CXCL1P09341 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CXCL1P09341 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CXCL1P09341 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CXCL1P09341 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CXCL1P09341 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CXCL1P09341 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
CXCL1P09341 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CXCL1P09341 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CXCL1P09341 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CXCL1P09341 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
CXCL1P09341 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CXCL1P09341 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CXCL1P09341 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CXCL1P09341 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CXCL1P09341 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms