Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.26■□□□□ 0.03
RETP07949 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RETP07949 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.26■□□□□ 0.03
RETP07949 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RETP07949 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RETP07949 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RETP07949 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RETP07949 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.26■□□□□ 0.03
RETP07949 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RETP07949 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RETP07949 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RETP07949 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
RETP07949 AC011477.6-201ENST00000604980 1927 ntBASIC15.25■□□□□ 0.03
RETP07949 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RETP07949 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RETP07949 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RETP07949 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RETP07949 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RETP07949 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RETP07949 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RETP07949 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.25■□□□□ 0.03
RETP07949 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.25■□□□□ 0.03
RETP07949 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RETP07949 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RETP07949 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.25■□□□□ 0.03
RETP07949 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.25■□□□□ 0.03
RETP07949 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC15.25■□□□□ 0.03
RETP07949 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC15.25■□□□□ 0.03
RETP07949 LY6E-208ENST00000520531 490 ntTSL 2 BASIC15.25■□□□□ 0.03
RETP07949 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.25■□□□□ 0.03
RETP07949 PGAM1P5-201ENST00000548011 764 ntBASIC15.25■□□□□ 0.03
RETP07949 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC15.25■□□□□ 0.03
RETP07949 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.25■□□□□ 0.03
RETP07949 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RETP07949 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RETP07949 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC15.25■□□□□ 0.03
RETP07949 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RETP07949 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
RETP07949 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.25■□□□□ 0.03
RETP07949 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RETP07949 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.25■□□□□ 0.03
RETP07949 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.25■□□□□ 0.03
RETP07949 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RETP07949 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RETP07949 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RETP07949 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RETP07949 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RETP07949 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
RETP07949 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RETP07949 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RETP07949 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RETP07949 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.24■□□□□ 0.03
RETP07949 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RETP07949 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.24■□□□□ 0.03
RETP07949 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RETP07949 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RETP07949 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.24■□□□□ 0.03
RETP07949 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RETP07949 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.24■□□□□ 0.03
RETP07949 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RETP07949 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
RETP07949 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
RETP07949 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RETP07949 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RETP07949 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.24■□□□□ 0.03
RETP07949 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
RETP07949 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
RETP07949 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RETP07949 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC15.24■□□□□ 0.03
RETP07949 AC234782.1-201ENST00000451950 919 ntBASIC15.24■□□□□ 0.03
RETP07949 AC012618.1-201ENST00000461223 412 ntBASIC15.24■□□□□ 0.03
RETP07949 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC15.24■□□□□ 0.03
RETP07949 PPY2P-201ENST00000582808 702 ntBASIC15.24■□□□□ 0.03
RETP07949 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RETP07949 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RETP07949 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RETP07949 AP000346.4-201ENST00000614827 381 ntBASIC15.24■□□□□ 0.03
RETP07949 AL023803.2-201ENST00000620080 638 ntBASIC15.24■□□□□ 0.03
RETP07949 ENPP7P14-201ENST00000621765 1040 ntBASIC15.24■□□□□ 0.03
RETP07949 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RETP07949 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.24■□□□□ 0.03
RETP07949 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.24■□□□□ 0.03
RETP07949 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RETP07949 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RETP07949 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RETP07949 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
RETP07949 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RETP07949 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RETP07949 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.24■□□□□ 0.03
RETP07949 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
RETP07949 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RETP07949 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
RETP07949 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
RETP07949 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RETP07949 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RETP07949 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.24■□□□□ 0.03
RETP07949 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RETP07949 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RETP07949 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RETP07949 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms