Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.68□□□□□ -0.22
HLA-DQA2P01906 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.68□□□□□ -0.22
HLA-DQA2P01906 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
HLA-DQA2P01906 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.68□□□□□ -0.22
HLA-DQA2P01906 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.68□□□□□ -0.22
HLA-DQA2P01906 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQA2P01906 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.68□□□□□ -0.22
HLA-DQA2P01906 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.68□□□□□ -0.22
HLA-DQA2P01906 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQA2P01906 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.68□□□□□ -0.22
HLA-DQA2P01906 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.68□□□□□ -0.22
HLA-DQA2P01906 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.68□□□□□ -0.22
HLA-DQA2P01906 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.68□□□□□ -0.22
HLA-DQA2P01906 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.68□□□□□ -0.22
HLA-DQA2P01906 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.68□□□□□ -0.22
HLA-DQA2P01906 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.68□□□□□ -0.22
HLA-DQA2P01906 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQA2P01906 AC044860.1-202ENST00000559481 777 ntBASIC13.68□□□□□ -0.22
HLA-DQA2P01906 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.68□□□□□ -0.22
HLA-DQA2P01906 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.68□□□□□ -0.22
HLA-DQA2P01906 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQA2P01906 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQA2P01906 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQA2P01906 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.68□□□□□ -0.22
HLA-DQA2P01906 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQA2P01906 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQA2P01906 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
HLA-DQA2P01906 REXO1L4P-201ENST00000605109 1937 ntBASIC13.68□□□□□ -0.22
HLA-DQA2P01906 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQA2P01906 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
HLA-DQA2P01906 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQA2P01906 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQA2P01906 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
HLA-DQA2P01906 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQA2P01906 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQA2P01906 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQA2P01906 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
HLA-DQA2P01906 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 AC026748.1-201ENST00000624349 3251 ntBASIC13.67□□□□□ -0.22
HLA-DQA2P01906 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 TOMM22P5-201ENST00000416399 439 ntBASIC13.67□□□□□ -0.22
HLA-DQA2P01906 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQA2P01906 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DQA2P01906 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DQA2P01906 AC087499.5-201ENST00000452760 1342 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms