Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CBX6O95503 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CBX6O95503 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CBX6O95503 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CBX6O95503 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CBX6O95503 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CBX6O95503 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.2■□□□□ 0.02
CBX6O95503 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC15.2■□□□□ 0.02
CBX6O95503 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.2■□□□□ 0.02
CBX6O95503 AL359881.3-201ENST00000602640 1721 ntBASIC15.2■□□□□ 0.02
CBX6O95503 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CBX6O95503 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CBX6O95503 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CBX6O95503 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CBX6O95503 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC15.2■□□□□ 0.02
CBX6O95503 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.2■□□□□ 0.02
CBX6O95503 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.2■□□□□ 0.02
CBX6O95503 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CBX6O95503 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CBX6O95503 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.19■□□□□ 0.02
CBX6O95503 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CBX6O95503 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CBX6O95503 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.19■□□□□ 0.02
CBX6O95503 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CBX6O95503 GALC-206ENST00000544807 2528 ntTSL 2 BASIC15.19■□□□□ 0.02
CBX6O95503 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CBX6O95503 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CBX6O95503 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CBX6O95503 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
CBX6O95503 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CBX6O95503 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CBX6O95503 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CBX6O95503 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CBX6O95503 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
CBX6O95503 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.19■□□□□ 0.02
CBX6O95503 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CBX6O95503 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
CBX6O95503 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.19■□□□□ 0.02
CBX6O95503 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CBX6O95503 PIN1P1-201ENST00000412108 996 ntBASIC15.19■□□□□ 0.02
CBX6O95503 NME2P1-201ENST00000426182 414 ntBASIC15.19■□□□□ 0.02
CBX6O95503 SERBP1P5-201ENST00000510079 1181 ntBASIC15.19■□□□□ 0.02
CBX6O95503 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.19■□□□□ 0.02
CBX6O95503 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.19■□□□□ 0.02
CBX6O95503 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.19■□□□□ 0.02
CBX6O95503 AL662799.1-202ENST00000614205 422 ntBASIC15.19■□□□□ 0.02
CBX6O95503 AC025048.6-201ENST00000634326 1161 ntBASIC15.19■□□□□ 0.02
CBX6O95503 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CBX6O95503 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.19■□□□□ 0.02
CBX6O95503 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CBX6O95503 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CBX6O95503 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CBX6O95503 AP000845.1-201ENST00000581677 2131 ntBASIC15.19■□□□□ 0.02
CBX6O95503 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CBX6O95503 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.19■□□□□ 0.02
CBX6O95503 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CBX6O95503 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CBX6O95503 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC15.18■□□□□ 0.02
CBX6O95503 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CBX6O95503 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CBX6O95503 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CBX6O95503 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CBX6O95503 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CBX6O95503 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CBX6O95503 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CBX6O95503 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CBX6O95503 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CBX6O95503 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CBX6O95503 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.18■□□□□ 0.02
CBX6O95503 AC241585.1-201ENST00000433527 519 ntBASIC15.18■□□□□ 0.02
CBX6O95503 AC004890.2-204ENST00000481968 304 ntBASIC15.18■□□□□ 0.02
CBX6O95503 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.18■□□□□ 0.02
CBX6O95503 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.18■□□□□ 0.02
CBX6O95503 AC109635.5-201ENST00000533593 962 ntBASIC15.18■□□□□ 0.02
CBX6O95503 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.18■□□□□ 0.02
CBX6O95503 AL596325.1-201ENST00000563991 1082 ntBASIC15.18■□□□□ 0.02
CBX6O95503 SPDYE22P-201ENST00000582158 798 ntBASIC15.18■□□□□ 0.02
CBX6O95503 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CBX6O95503 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.18■□□□□ 0.02
CBX6O95503 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CBX6O95503 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CBX6O95503 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.18■□□□□ 0.02
CBX6O95503 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CBX6O95503 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CBX6O95503 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.18■□□□□ 0.02
CBX6O95503 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CBX6O95503 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CBX6O95503 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
CBX6O95503 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CBX6O95503 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CBX6O95503 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.18■□□□□ 0.02
CBX6O95503 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CBX6O95503 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CBX6O95503 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CBX6O95503 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CBX6O95503 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CBX6O95503 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CBX6O95503 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CBX6O95503 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.17■□□□□ 0.02
CBX6O95503 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms