Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LTN1O94822 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.5■□□□□ 0.71
LTN1O94822 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LTN1O94822 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LTN1O94822 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LTN1O94822 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC19.49■□□□□ 0.71
LTN1O94822 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LTN1O94822 SIGLEC18P-201ENST00000602271 909 ntBASIC19.49■□□□□ 0.71
LTN1O94822 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
LTN1O94822 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LTN1O94822 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC19.49■□□□□ 0.71
LTN1O94822 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC19.49■□□□□ 0.71
LTN1O94822 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LTN1O94822 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LTN1O94822 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LTN1O94822 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC19.49■□□□□ 0.71
LTN1O94822 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LTN1O94822 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC19.49■□□□□ 0.71
LTN1O94822 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
LTN1O94822 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC19.49■□□□□ 0.71
LTN1O94822 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC19.49■□□□□ 0.71
LTN1O94822 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
LTN1O94822 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LTN1O94822 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
LTN1O94822 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LTN1O94822 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
LTN1O94822 HIST2H2BA-201ENST00000412169 381 ntBASIC19.49■□□□□ 0.71
LTN1O94822 RPL7P35-201ENST00000446943 740 ntBASIC19.49■□□□□ 0.71
LTN1O94822 KRT18P66-201ENST00000452970 1269 ntBASIC19.49■□□□□ 0.71
LTN1O94822 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC19.49■□□□□ 0.71
LTN1O94822 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
LTN1O94822 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC19.49■□□□□ 0.71
LTN1O94822 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC19.49■□□□□ 0.71
LTN1O94822 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LTN1O94822 AC007326.1-201ENST00000604539 458 ntBASIC19.49■□□□□ 0.71
LTN1O94822 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC19.49■□□□□ 0.71
LTN1O94822 MIR6756-201ENST00000616240 63 ntBASIC19.49■□□□□ 0.71
LTN1O94822 MIR6858-201ENST00000620733 67 ntBASIC19.49■□□□□ 0.71
LTN1O94822 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LTN1O94822 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LTN1O94822 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LTN1O94822 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LTN1O94822 AP002353.1-201ENST00000528257 1599 ntBASIC19.49■□□□□ 0.71
LTN1O94822 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC19.49■□□□□ 0.71
LTN1O94822 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LTN1O94822 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
LTN1O94822 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LTN1O94822 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LTN1O94822 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC19.48■□□□□ 0.71
LTN1O94822 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC19.48■□□□□ 0.71
LTN1O94822 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LTN1O94822 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
LTN1O94822 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
LTN1O94822 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LTN1O94822 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LTN1O94822 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
LTN1O94822 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LTN1O94822 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
LTN1O94822 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
LTN1O94822 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LTN1O94822 NUDT4P2-201ENST00000578341 546 ntBASIC19.48■□□□□ 0.71
LTN1O94822 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC19.48■□□□□ 0.71
LTN1O94822 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
LTN1O94822 AC087392.5-201ENST00000612517 489 ntBASIC19.48■□□□□ 0.71
LTN1O94822 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC19.48■□□□□ 0.71
LTN1O94822 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LTN1O94822 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LTN1O94822 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LTN1O94822 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LTN1O94822 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC19.48■□□□□ 0.71
LTN1O94822 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
LTN1O94822 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC19.47■□□□□ 0.71
LTN1O94822 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.47■□□□□ 0.71
LTN1O94822 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC19.47■□□□□ 0.71
LTN1O94822 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LTN1O94822 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
LTN1O94822 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LTN1O94822 OR8T1P-201ENST00000421347 918 ntBASIC19.47■□□□□ 0.71
LTN1O94822 HPGD-203ENST00000422112 805 ntTSL 2 BASIC19.47■□□□□ 0.71
LTN1O94822 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LTN1O94822 AC018463.1-201ENST00000456674 917 ntBASIC19.47■□□□□ 0.71
LTN1O94822 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC19.47■□□□□ 0.71
LTN1O94822 KRT8P1-201ENST00000557533 1207 ntBASIC19.47■□□□□ 0.71
LTN1O94822 RN7SL665P-201ENST00000578793 300 ntBASIC19.47■□□□□ 0.71
LTN1O94822 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC19.47■□□□□ 0.71
LTN1O94822 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC19.47■□□□□ 0.71
LTN1O94822 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC19.47■□□□□ 0.71
LTN1O94822 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LTN1O94822 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC19.47■□□□□ 0.71
LTN1O94822 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LTN1O94822 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
LTN1O94822 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC19.47■□□□□ 0.71
LTN1O94822 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC19.47■□□□□ 0.71
LTN1O94822 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LTN1O94822 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LTN1O94822 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
LTN1O94822 HLA-DQB1-202ENST00000399079 1501 ntBASIC19.47■□□□□ 0.71
LTN1O94822 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
LTN1O94822 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LTN1O94822 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms