Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC6.54□□□□□ -1.36
USH2AO75445 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 JTB-202ENST00000356648 1040 ntTSL 2 BASIC6.54□□□□□ -1.36
USH2AO75445 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 DNM1P48-201ENST00000419538 439 ntBASIC6.54□□□□□ -1.36
USH2AO75445 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC6.54□□□□□ -1.36
USH2AO75445 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC6.54□□□□□ -1.36
USH2AO75445 RN7SL767P-201ENST00000493013 295 ntBASIC6.54□□□□□ -1.36
USH2AO75445 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC6.54□□□□□ -1.36
USH2AO75445 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC6.54□□□□□ -1.36
USH2AO75445 EHF-205ENST00000527935 557 ntTSL 2 BASIC6.54□□□□□ -1.36
USH2AO75445 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC6.54□□□□□ -1.36
USH2AO75445 CES1P2-201ENST00000566467 1242 ntBASIC6.54□□□□□ -1.36
USH2AO75445 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC6.54□□□□□ -1.36
USH2AO75445 RN7SL602P-201ENST00000578326 324 ntBASIC6.54□□□□□ -1.36
USH2AO75445 RN7SL718P-201ENST00000581254 303 ntBASIC6.54□□□□□ -1.36
USH2AO75445 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC6.54□□□□□ -1.36
USH2AO75445 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
USH2AO75445 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC6.54□□□□□ -1.36
USH2AO75445 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC6.54□□□□□ -1.36
USH2AO75445 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC6.54□□□□□ -1.36
USH2AO75445 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC6.54□□□□□ -1.36
USH2AO75445 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC6.54□□□□□ -1.36
USH2AO75445 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
USH2AO75445 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC6.54□□□□□ -1.36
USH2AO75445 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC6.54□□□□□ -1.36
USH2AO75445 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC6.54□□□□□ -1.36
USH2AO75445 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC6.54□□□□□ -1.36
USH2AO75445 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC6.54□□□□□ -1.36
USH2AO75445 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
USH2AO75445 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC6.54□□□□□ -1.36
USH2AO75445 POLR2LP1-206ENST00000444785 187 ntBASIC6.54□□□□□ -1.36
USH2AO75445 RN7SL375P-201ENST00000492442 298 ntBASIC6.54□□□□□ -1.36
USH2AO75445 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC6.54□□□□□ -1.36
USH2AO75445 AC005921.2-201ENST00000574246 670 ntTSL 5 BASIC6.54□□□□□ -1.36
USH2AO75445 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC6.54□□□□□ -1.36
USH2AO75445 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC6.54□□□□□ -1.36
USH2AO75445 AC005746.3-201ENST00000614751 393 ntBASIC6.54□□□□□ -1.36
USH2AO75445 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC6.54□□□□□ -1.36
USH2AO75445 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC6.54□□□□□ -1.36
USH2AO75445 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC6.54□□□□□ -1.36
USH2AO75445 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC6.54□□□□□ -1.36
USH2AO75445 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
USH2AO75445 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC6.53□□□□□ -1.36
USH2AO75445 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC6.53□□□□□ -1.36
USH2AO75445 XBP1P1-201ENST00000436573 652 ntBASIC6.53□□□□□ -1.36
USH2AO75445 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC6.53□□□□□ -1.36
USH2AO75445 RN7SL277P-201ENST00000481521 288 ntBASIC6.53□□□□□ -1.36
USH2AO75445 ACY3-202ENST00000529256 933 ntTSL 3 BASIC6.53□□□□□ -1.36
USH2AO75445 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC6.53□□□□□ -1.36
USH2AO75445 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC6.53□□□□□ -1.36
USH2AO75445 AP000322.3-201ENST00000608665 388 ntBASIC6.53□□□□□ -1.36
USH2AO75445 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC6.53□□□□□ -1.36
USH2AO75445 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
USH2AO75445 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
USH2AO75445 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC6.53□□□□□ -1.36
USH2AO75445 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC6.53□□□□□ -1.36
USH2AO75445 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC6.53□□□□□ -1.36
USH2AO75445 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC6.53□□□□□ -1.36
USH2AO75445 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC6.53□□□□□ -1.36
USH2AO75445 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC6.53□□□□□ -1.36
USH2AO75445 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 AC106785.2-201ENST00000564385 1319 ntBASIC6.53□□□□□ -1.36
USH2AO75445 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 OR7E12P-201ENST00000344740 973 ntBASIC6.53□□□□□ -1.36
USH2AO75445 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 OR52M2P-201ENST00000414298 959 ntBASIC6.53□□□□□ -1.36
USH2AO75445 AC004910.1-201ENST00000433493 787 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms