Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PMPCBO75439 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PMPCBO75439 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.41■□□□□ 0.06
PMPCBO75439 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PMPCBO75439 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.41■□□□□ 0.06
PMPCBO75439 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.41■□□□□ 0.06
PMPCBO75439 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PMPCBO75439 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.41■□□□□ 0.06
PMPCBO75439 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.41■□□□□ 0.06
PMPCBO75439 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.41■□□□□ 0.06
PMPCBO75439 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.41■□□□□ 0.06
PMPCBO75439 PRSS30P-206ENST00000641773 873 ntBASIC15.41■□□□□ 0.06
PMPCBO75439 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
PMPCBO75439 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PMPCBO75439 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
PMPCBO75439 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PMPCBO75439 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PMPCBO75439 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PMPCBO75439 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
PMPCBO75439 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
PMPCBO75439 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PMPCBO75439 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PMPCBO75439 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PMPCBO75439 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PMPCBO75439 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.41■□□□□ 0.06
PMPCBO75439 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.41■□□□□ 0.06
PMPCBO75439 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.41■□□□□ 0.06
PMPCBO75439 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.41■□□□□ 0.06
PMPCBO75439 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PMPCBO75439 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PMPCBO75439 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.41■□□□□ 0.06
PMPCBO75439 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PMPCBO75439 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PMPCBO75439 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PMPCBO75439 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PMPCBO75439 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.4■□□□□ 0.06
PMPCBO75439 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.4■□□□□ 0.06
PMPCBO75439 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PMPCBO75439 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PMPCBO75439 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.4■□□□□ 0.06
PMPCBO75439 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PMPCBO75439 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PMPCBO75439 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.4■□□□□ 0.06
PMPCBO75439 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PMPCBO75439 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PMPCBO75439 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PMPCBO75439 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.4■□□□□ 0.06
PMPCBO75439 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PMPCBO75439 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
PMPCBO75439 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PMPCBO75439 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PMPCBO75439 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PMPCBO75439 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PMPCBO75439 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PMPCBO75439 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PMPCBO75439 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.4■□□□□ 0.06
PMPCBO75439 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PMPCBO75439 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PMPCBO75439 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PMPCBO75439 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
PMPCBO75439 AL139094.1-201ENST00000405549 1188 ntBASIC15.4■□□□□ 0.06
PMPCBO75439 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.4■□□□□ 0.06
PMPCBO75439 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.4■□□□□ 0.06
PMPCBO75439 AL162726.2-201ENST00000438986 1017 ntBASIC15.4■□□□□ 0.06
PMPCBO75439 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.4■□□□□ 0.06
PMPCBO75439 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PMPCBO75439 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PMPCBO75439 ENPP7P5-201ENST00000541031 1031 ntBASIC15.4■□□□□ 0.06
PMPCBO75439 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.4■□□□□ 0.06
PMPCBO75439 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.4■□□□□ 0.06
PMPCBO75439 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PMPCBO75439 CLUHP6-201ENST00000580789 941 ntBASIC15.4■□□□□ 0.06
PMPCBO75439 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.4■□□□□ 0.06
PMPCBO75439 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PMPCBO75439 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.4■□□□□ 0.06
PMPCBO75439 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.4■□□□□ 0.06
PMPCBO75439 AC015656.1-201ENST00000624209 3578 ntBASIC15.4■□□□□ 0.06
PMPCBO75439 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PMPCBO75439 AC018529.2-202ENST00000611482 3087 ntBASIC15.4■□□□□ 0.06
PMPCBO75439 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PMPCBO75439 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PMPCBO75439 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PMPCBO75439 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PMPCBO75439 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
PMPCBO75439 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PMPCBO75439 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PMPCBO75439 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PMPCBO75439 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PMPCBO75439 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PMPCBO75439 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.4■□□□□ 0.06
PMPCBO75439 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PMPCBO75439 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PMPCBO75439 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PMPCBO75439 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PMPCBO75439 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PMPCBO75439 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PMPCBO75439 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
PMPCBO75439 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PMPCBO75439 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PMPCBO75439 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms