Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.72■□□□□ 0.11
LRCH4O75427 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
LRCH4O75427 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.72■□□□□ 0.11
LRCH4O75427 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.72■□□□□ 0.11
LRCH4O75427 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.72■□□□□ 0.11
LRCH4O75427 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRCH4O75427 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LRCH4O75427 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.72■□□□□ 0.11
LRCH4O75427 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.72■□□□□ 0.11
LRCH4O75427 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LRCH4O75427 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRCH4O75427 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRCH4O75427 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRCH4O75427 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRCH4O75427 BX640514.1-201ENST00000583223 1918 ntBASIC15.72■□□□□ 0.11
LRCH4O75427 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRCH4O75427 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
LRCH4O75427 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LRCH4O75427 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
LRCH4O75427 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.71■□□□□ 0.11
LRCH4O75427 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.71■□□□□ 0.11
LRCH4O75427 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRCH4O75427 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.71■□□□□ 0.11
LRCH4O75427 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
LRCH4O75427 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRCH4O75427 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
LRCH4O75427 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRCH4O75427 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRCH4O75427 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRCH4O75427 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
LRCH4O75427 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRCH4O75427 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.71■□□□□ 0.11
LRCH4O75427 KRT18P25-201ENST00000508931 1278 ntBASIC15.71■□□□□ 0.11
LRCH4O75427 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.71■□□□□ 0.11
LRCH4O75427 AC009486.1-201ENST00000569860 813 ntBASIC15.71■□□□□ 0.11
LRCH4O75427 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.71■□□□□ 0.11
LRCH4O75427 AC004466.1-201ENST00000599515 1080 ntBASIC15.71■□□□□ 0.11
LRCH4O75427 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRCH4O75427 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRCH4O75427 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
LRCH4O75427 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRCH4O75427 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
LRCH4O75427 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
LRCH4O75427 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.71■□□□□ 0.1
LRCH4O75427 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.71■□□□□ 0.1
LRCH4O75427 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.71■□□□□ 0.1
LRCH4O75427 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.71■□□□□ 0.1
LRCH4O75427 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH4O75427 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH4O75427 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.7■□□□□ 0.1
LRCH4O75427 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.7■□□□□ 0.1
LRCH4O75427 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH4O75427 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH4O75427 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
LRCH4O75427 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
LRCH4O75427 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.7■□□□□ 0.1
LRCH4O75427 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LRCH4O75427 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH4O75427 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH4O75427 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH4O75427 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
LRCH4O75427 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH4O75427 AL354702.1-201ENST00000442006 1960 ntBASIC15.7■□□□□ 0.1
LRCH4O75427 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH4O75427 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH4O75427 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH4O75427 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH4O75427 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH4O75427 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
LRCH4O75427 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH4O75427 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.7■□□□□ 0.1
LRCH4O75427 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH4O75427 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
LRCH4O75427 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
LRCH4O75427 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH4O75427 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LRCH4O75427 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.7■□□□□ 0.1
LRCH4O75427 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.7■□□□□ 0.1
LRCH4O75427 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.7■□□□□ 0.1
LRCH4O75427 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH4O75427 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH4O75427 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH4O75427 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.7■□□□□ 0.1
LRCH4O75427 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LRCH4O75427 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.7■□□□□ 0.1
LRCH4O75427 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.7■□□□□ 0.1
LRCH4O75427 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH4O75427 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH4O75427 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH4O75427 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.69■□□□□ 0.1
LRCH4O75427 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.69■□□□□ 0.1
LRCH4O75427 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.69■□□□□ 0.1
LRCH4O75427 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRCH4O75427 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRCH4O75427 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRCH4O75427 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRCH4O75427 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRCH4O75427 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
LRCH4O75427 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRCH4O75427 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms