Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC11.89□□□□□ -0.51
ZNF253O75346 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC11.89□□□□□ -0.51
ZNF253O75346 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC11.89□□□□□ -0.51
ZNF253O75346 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC11.89□□□□□ -0.51
ZNF253O75346 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC11.89□□□□□ -0.51
ZNF253O75346 CMC2-214ENST00000565925 640 ntTSL 5 BASIC11.89□□□□□ -0.51
ZNF253O75346 AC140113.2-201ENST00000604370 208 ntBASIC11.89□□□□□ -0.51
ZNF253O75346 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC11.89□□□□□ -0.51
ZNF253O75346 BX640515.1-201ENST00000617215 977 ntBASIC11.89□□□□□ -0.51
ZNF253O75346 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 TKT-201ENST00000296289 1931 ntTSL 5 BASIC11.89□□□□□ -0.51
ZNF253O75346 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
ZNF253O75346 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
ZNF253O75346 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
ZNF253O75346 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC11.89□□□□□ -0.51
ZNF253O75346 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC11.89□□□□□ -0.51
ZNF253O75346 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC11.89□□□□□ -0.51
ZNF253O75346 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
ZNF253O75346 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
ZNF253O75346 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
ZNF253O75346 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
ZNF253O75346 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
ZNF253O75346 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
ZNF253O75346 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC11.89□□□□□ -0.51
ZNF253O75346 SLC6A6P1-201ENST00000413933 1850 ntBASIC11.89□□□□□ -0.51
ZNF253O75346 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
ZNF253O75346 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZNF253O75346 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ZNF253O75346 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ZNF253O75346 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ZNF253O75346 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
ZNF253O75346 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC11.88□□□□□ -0.51
ZNF253O75346 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
ZNF253O75346 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ZNF253O75346 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ZNF253O75346 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ZNF253O75346 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ZNF253O75346 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC11.88□□□□□ -0.51
ZNF253O75346 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ZNF253O75346 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
ZNF253O75346 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC11.88□□□□□ -0.51
ZNF253O75346 AL139385.1-201ENST00000611744 3272 ntBASIC11.88□□□□□ -0.51
ZNF253O75346 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ZNF253O75346 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ZNF253O75346 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ZNF253O75346 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ZNF253O75346 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
ZNF253O75346 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ZNF253O75346 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ZNF253O75346 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ZNF253O75346 SPDYE17-201ENST00000412399 783 ntBASIC11.88□□□□□ -0.51
ZNF253O75346 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC11.88□□□□□ -0.51
ZNF253O75346 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC11.88□□□□□ -0.51
ZNF253O75346 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC11.88□□□□□ -0.51
ZNF253O75346 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC11.88□□□□□ -0.51
ZNF253O75346 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC11.88□□□□□ -0.51
ZNF253O75346 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
ZNF253O75346 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC11.88□□□□□ -0.51
ZNF253O75346 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC11.88□□□□□ -0.51
ZNF253O75346 PIN1-206ENST00000587625 878 ntTSL 2 BASIC11.88□□□□□ -0.51
ZNF253O75346 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC11.88□□□□□ -0.51
ZNF253O75346 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC11.88□□□□□ -0.51
ZNF253O75346 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC11.88□□□□□ -0.51
ZNF253O75346 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
ZNF253O75346 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ZNF253O75346 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC11.88□□□□□ -0.51
ZNF253O75346 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
ZNF253O75346 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC11.88□□□□□ -0.51
ZNF253O75346 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ZNF253O75346 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ZNF253O75346 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
ZNF253O75346 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC11.88□□□□□ -0.51
ZNF253O75346 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ZNF253O75346 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ZNF253O75346 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ZNF253O75346 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ZNF253O75346 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC11.88□□□□□ -0.51
ZNF253O75346 USP3-204ENST00000540797 5474 ntTSL 2 BASIC11.88□□□□□ -0.51
ZNF253O75346 FUK-202ENST00000378912 3925 ntTSL 2 BASIC11.88□□□□□ -0.51
ZNF253O75346 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
ZNF253O75346 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ZNF253O75346 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
ZNF253O75346 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms