Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AC015802.1-201ENST00000588104 1449 ntBASIC14.38□□□□□ -0.11
SCN2BO60939 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCN2BO60939 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SCN2BO60939 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SCN2BO60939 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SCN2BO60939 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCN2BO60939 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.38□□□□□ -0.11
SCN2BO60939 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCN2BO60939 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.38□□□□□ -0.11
SCN2BO60939 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.38□□□□□ -0.11
SCN2BO60939 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.38□□□□□ -0.11
SCN2BO60939 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SCN2BO60939 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.38□□□□□ -0.11
SCN2BO60939 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SCN2BO60939 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCN2BO60939 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.38□□□□□ -0.11
SCN2BO60939 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCN2BO60939 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCN2BO60939 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SCN2BO60939 AL158070.2-201ENST00000623713 1621 ntBASIC14.37□□□□□ -0.11
SCN2BO60939 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCN2BO60939 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCN2BO60939 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCN2BO60939 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCN2BO60939 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCN2BO60939 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCN2BO60939 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCN2BO60939 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCN2BO60939 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
SCN2BO60939 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.37□□□□□ -0.11
SCN2BO60939 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.37□□□□□ -0.11
SCN2BO60939 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SCN2BO60939 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCN2BO60939 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.37□□□□□ -0.11
SCN2BO60939 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.37□□□□□ -0.11
SCN2BO60939 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.37□□□□□ -0.11
SCN2BO60939 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCN2BO60939 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.37□□□□□ -0.11
SCN2BO60939 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCN2BO60939 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.37□□□□□ -0.11
SCN2BO60939 RARRES2P5-201ENST00000564013 466 ntBASIC14.37□□□□□ -0.11
SCN2BO60939 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.37□□□□□ -0.11
SCN2BO60939 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.37□□□□□ -0.11
SCN2BO60939 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.37□□□□□ -0.11
SCN2BO60939 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.37□□□□□ -0.11
SCN2BO60939 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.37□□□□□ -0.11
SCN2BO60939 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCN2BO60939 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCN2BO60939 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCN2BO60939 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCN2BO60939 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
SCN2BO60939 AL137783.1-201ENST00000623494 1896 ntBASIC14.37□□□□□ -0.11
SCN2BO60939 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCN2BO60939 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCN2BO60939 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
SCN2BO60939 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCN2BO60939 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCN2BO60939 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SCN2BO60939 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.37□□□□□ -0.11
SCN2BO60939 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCN2BO60939 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.36□□□□□ -0.11
SCN2BO60939 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SCN2BO60939 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SCN2BO60939 AL138799.1-201ENST00000448213 1675 ntBASIC14.36□□□□□ -0.11
SCN2BO60939 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.36□□□□□ -0.11
SCN2BO60939 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.36□□□□□ -0.11
SCN2BO60939 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.36□□□□□ -0.11
SCN2BO60939 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SCN2BO60939 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCN2BO60939 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SCN2BO60939 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SCN2BO60939 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SCN2BO60939 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SCN2BO60939 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCN2BO60939 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SCN2BO60939 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCN2BO60939 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.36□□□□□ -0.11
SCN2BO60939 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.36□□□□□ -0.11
SCN2BO60939 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.36□□□□□ -0.11
SCN2BO60939 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.36□□□□□ -0.11
SCN2BO60939 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCN2BO60939 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.36□□□□□ -0.11
SCN2BO60939 AC067750.1-201ENST00000608826 6545 ntBASIC14.36□□□□□ -0.11
SCN2BO60939 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCN2BO60939 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCN2BO60939 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SCN2BO60939 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCN2BO60939 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SCN2BO60939 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCN2BO60939 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SCN2BO60939 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.36□□□□□ -0.11
SCN2BO60939 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.36□□□□□ -0.11
SCN2BO60939 AC055876.3-201ENST00000431496 288 ntBASIC14.36□□□□□ -0.11
SCN2BO60939 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.36□□□□□ -0.11
SCN2BO60939 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.36□□□□□ -0.11
SCN2BO60939 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.36□□□□□ -0.11
SCN2BO60939 AC138649.4-201ENST00000612222 287 ntBASIC14.36□□□□□ -0.11
SCN2BO60939 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SCN2BO60939 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCN2BO60939 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms