Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.04■□□□□ -0
PCDHGA12O60330 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.04■□□□□ -0
PCDHGA12O60330 MIR4313-201ENST00000580760 101 ntBASIC15.04■□□□□ -0
PCDHGA12O60330 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC15.04■□□□□ -0
PCDHGA12O60330 AC015967.2-201ENST00000624092 234 ntBASIC15.04■□□□□ -0
PCDHGA12O60330 AC006435.4-201ENST00000625037 234 ntBASIC15.04■□□□□ -0
PCDHGA12O60330 AL356737.1-201ENST00000634391 234 ntBASIC15.04■□□□□ -0
PCDHGA12O60330 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.04■□□□□ -0
PCDHGA12O60330 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHGA12O60330 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.04■□□□□ -0
PCDHGA12O60330 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHGA12O60330 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHGA12O60330 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.04■□□□□ -0
PCDHGA12O60330 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.04■□□□□ -0
PCDHGA12O60330 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHGA12O60330 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHGA12O60330 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHGA12O60330 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHGA12O60330 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHGA12O60330 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.04■□□□□ -0
PCDHGA12O60330 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHGA12O60330 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA12O60330 NORAD-201ENST00000565493 5339 ntBASIC15.03■□□□□ -0
PCDHGA12O60330 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PCDHGA12O60330 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA12O60330 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA12O60330 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA12O60330 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.03■□□□□ -0
PCDHGA12O60330 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.03■□□□□ -0
PCDHGA12O60330 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA12O60330 AP003680.1-201ENST00000598970 3660 ntBASIC15.03■□□□□ -0
PCDHGA12O60330 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
PCDHGA12O60330 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PCDHGA12O60330 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA12O60330 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA12O60330 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.03■□□□□ -0
PCDHGA12O60330 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PCDHGA12O60330 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA12O60330 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
PCDHGA12O60330 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.03■□□□□ -0
PCDHGA12O60330 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA12O60330 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA12O60330 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA12O60330 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA12O60330 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA12O60330 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA12O60330 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.03■□□□□ -0
PCDHGA12O60330 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
PCDHGA12O60330 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA12O60330 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
PCDHGA12O60330 AC079178.1-201ENST00000420915 656 ntBASIC15.03■□□□□ -0
PCDHGA12O60330 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.03■□□□□ -0
PCDHGA12O60330 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.03■□□□□ -0
PCDHGA12O60330 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.03■□□□□ -0
PCDHGA12O60330 HSPB1P2-201ENST00000448722 546 ntBASIC15.03■□□□□ -0
PCDHGA12O60330 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.03■□□□□ -0
PCDHGA12O60330 AC126915.1-201ENST00000522847 1038 ntBASIC15.03■□□□□ -0
PCDHGA12O60330 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.03■□□□□ -0
PCDHGA12O60330 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.03■□□□□ -0
PCDHGA12O60330 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA12O60330 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.03■□□□□ -0
PCDHGA12O60330 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
PCDHGA12O60330 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PCDHGA12O60330 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.03■□□□□ -0
PCDHGA12O60330 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
PCDHGA12O60330 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.03■□□□□ -0
PCDHGA12O60330 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.03■□□□□ -0
PCDHGA12O60330 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.03■□□□□ -0
PCDHGA12O60330 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA12O60330 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA12O60330 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA12O60330 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA12O60330 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA12O60330 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.03■□□□□ -0
PCDHGA12O60330 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA12O60330 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA12O60330 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA12O60330 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA12O60330 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA12O60330 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.02■□□□□ -0
PCDHGA12O60330 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.02■□□□□ -0
PCDHGA12O60330 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.02■□□□□ -0
PCDHGA12O60330 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA12O60330 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA12O60330 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.02■□□□□ -0
PCDHGA12O60330 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA12O60330 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.02■□□□□ -0
PCDHGA12O60330 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA12O60330 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA12O60330 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA12O60330 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA12O60330 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA12O60330 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.02■□□□□ -0
PCDHGA12O60330 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA12O60330 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA12O60330 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA12O60330 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA12O60330 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA12O60330 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.02■□□□□ -0
PCDHGA12O60330 AL645937.2-201ENST00000396808 931 ntBASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms