Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A1O14983 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A1O14983 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A1O14983 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
ATP2A1O14983 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.23■□□□□ 0.35
ATP2A1O14983 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A1O14983 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A1O14983 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ATP2A1O14983 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A1O14983 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A1O14983 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A1O14983 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ATP2A1O14983 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A1O14983 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A1O14983 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A1O14983 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
ATP2A1O14983 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ATP2A1O14983 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A1O14983 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A1O14983 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A1O14983 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A1O14983 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC17.23■□□□□ 0.35
ATP2A1O14983 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.23■□□□□ 0.35
ATP2A1O14983 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.23■□□□□ 0.35
ATP2A1O14983 AC021723.1-201ENST00000486306 515 ntBASIC17.23■□□□□ 0.35
ATP2A1O14983 AC005740.2-201ENST00000511085 419 ntBASIC17.23■□□□□ 0.35
ATP2A1O14983 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ATP2A1O14983 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP2A1O14983 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.23■□□□□ 0.35
ATP2A1O14983 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP2A1O14983 AL645939.5-201ENST00000606834 243 ntBASIC17.23■□□□□ 0.35
ATP2A1O14983 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ATP2A1O14983 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
ATP2A1O14983 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP2A1O14983 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A1O14983 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.23■□□□□ 0.35
ATP2A1O14983 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A1O14983 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A1O14983 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A1O14983 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A1O14983 AC011270.2-201ENST00000624293 2550 ntBASIC17.23■□□□□ 0.35
ATP2A1O14983 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A1O14983 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.22■□□□□ 0.35
ATP2A1O14983 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.22■□□□□ 0.35
ATP2A1O14983 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A1O14983 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ATP2A1O14983 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A1O14983 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ATP2A1O14983 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A1O14983 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A1O14983 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.22■□□□□ 0.35
ATP2A1O14983 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A1O14983 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A1O14983 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.22■□□□□ 0.35
ATP2A1O14983 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A1O14983 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.22■□□□□ 0.35
ATP2A1O14983 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.22■□□□□ 0.35
ATP2A1O14983 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.22■□□□□ 0.35
ATP2A1O14983 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.22■□□□□ 0.35
ATP2A1O14983 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A1O14983 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A1O14983 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.22■□□□□ 0.35
ATP2A1O14983 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A1O14983 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A1O14983 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.22■□□□□ 0.35
ATP2A1O14983 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.22■□□□□ 0.35
ATP2A1O14983 ALG3P1-201ENST00000508806 1114 ntBASIC17.22■□□□□ 0.35
ATP2A1O14983 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.22■□□□□ 0.35
ATP2A1O14983 CHMP4BP1-201ENST00000556017 588 ntBASIC17.22■□□□□ 0.35
ATP2A1O14983 DUX4L46-201ENST00000566845 751 ntBASIC17.22■□□□□ 0.35
ATP2A1O14983 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.22■□□□□ 0.35
ATP2A1O14983 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
ATP2A1O14983 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A1O14983 LILRP1-201ENST00000444199 1370 ntBASIC17.22■□□□□ 0.35
ATP2A1O14983 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.22■□□□□ 0.35
ATP2A1O14983 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A1O14983 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A1O14983 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A1O14983 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A1O14983 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A1O14983 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A1O14983 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A1O14983 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A1O14983 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.22■□□□□ 0.35
ATP2A1O14983 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.22■□□□□ 0.35
ATP2A1O14983 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.22■□□□□ 0.35
ATP2A1O14983 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A1O14983 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.22■□□□□ 0.35
ATP2A1O14983 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A1O14983 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A1O14983 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A1O14983 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A1O14983 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A1O14983 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A1O14983 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.21■□□□□ 0.35
ATP2A1O14983 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
ATP2A1O14983 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A1O14983 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A1O14983 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A1O14983 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms