Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.04■□□□□ -0
TBC1D3FA6NER0 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TBC1D3FA6NER0 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.04■□□□□ -0
TBC1D3FA6NER0 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
TBC1D3FA6NER0 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TBC1D3FA6NER0 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.03■□□□□ -0
TBC1D3FA6NER0 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
TBC1D3FA6NER0 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TBC1D3FA6NER0 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TBC1D3FA6NER0 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TBC1D3FA6NER0 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
TBC1D3FA6NER0 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TBC1D3FA6NER0 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TBC1D3FA6NER0 AC138028.6-201ENST00000616106 1482 ntBASIC15.03■□□□□ -0
TBC1D3FA6NER0 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TBC1D3FA6NER0 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TBC1D3FA6NER0 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.03■□□□□ -0
TBC1D3FA6NER0 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.03■□□□□ -0
TBC1D3FA6NER0 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.03■□□□□ -0
TBC1D3FA6NER0 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.03■□□□□ -0
TBC1D3FA6NER0 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TBC1D3FA6NER0 AC021723.1-201ENST00000486306 515 ntBASIC15.03■□□□□ -0
TBC1D3FA6NER0 AC091804.1-201ENST00000486888 567 ntBASIC15.03■□□□□ -0
TBC1D3FA6NER0 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.03■□□□□ -0
TBC1D3FA6NER0 SCARNA20.5-201ENST00000516991 142 ntBASIC15.03■□□□□ -0
TBC1D3FA6NER0 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.03■□□□□ -0
TBC1D3FA6NER0 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
TBC1D3FA6NER0 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.03■□□□□ -0
TBC1D3FA6NER0 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.03■□□□□ -0
TBC1D3FA6NER0 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.03■□□□□ -0
TBC1D3FA6NER0 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.03■□□□□ -0
TBC1D3FA6NER0 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.03■□□□□ -0
TBC1D3FA6NER0 AC068587.10-201ENST00000641210 219 ntBASIC15.03■□□□□ -0
TBC1D3FA6NER0 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.03■□□□□ -0
TBC1D3FA6NER0 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TBC1D3FA6NER0 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.03■□□□□ -0
TBC1D3FA6NER0 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.03■□□□□ -0
TBC1D3FA6NER0 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TBC1D3FA6NER0 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.03■□□□□ -0
TBC1D3FA6NER0 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TBC1D3FA6NER0 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TBC1D3FA6NER0 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TBC1D3FA6NER0 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.03■□□□□ -0
TBC1D3FA6NER0 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TBC1D3FA6NER0 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TBC1D3FA6NER0 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.03■□□□□ -0
TBC1D3FA6NER0 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TBC1D3FA6NER0 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TBC1D3FA6NER0 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
TBC1D3FA6NER0 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TBC1D3FA6NER0 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
TBC1D3FA6NER0 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
TBC1D3FA6NER0 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TBC1D3FA6NER0 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.02■□□□□ -0
TBC1D3FA6NER0 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TBC1D3FA6NER0 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
TBC1D3FA6NER0 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TBC1D3FA6NER0 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.02■□□□□ -0
TBC1D3FA6NER0 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.02■□□□□ -0
TBC1D3FA6NER0 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.02■□□□□ -0
TBC1D3FA6NER0 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TBC1D3FA6NER0 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TBC1D3FA6NER0 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
TBC1D3FA6NER0 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.02■□□□□ -0
TBC1D3FA6NER0 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
TBC1D3FA6NER0 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.02■□□□□ -0
TBC1D3FA6NER0 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
TBC1D3FA6NER0 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
TBC1D3FA6NER0 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.02■□□□□ -0
TBC1D3FA6NER0 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TBC1D3FA6NER0 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.02■□□□□ -0
TBC1D3FA6NER0 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TBC1D3FA6NER0 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
TBC1D3FA6NER0 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TBC1D3FA6NER0 AC004945.1-201ENST00000416738 983 ntBASIC15.02■□□□□ -0
TBC1D3FA6NER0 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.02■□□□□ -0
TBC1D3FA6NER0 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.02■□□□□ -0
TBC1D3FA6NER0 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.02■□□□□ -0
TBC1D3FA6NER0 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.02■□□□□ -0
TBC1D3FA6NER0 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TBC1D3FA6NER0 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.02■□□□□ -0
TBC1D3FA6NER0 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.02■□□□□ -0
TBC1D3FA6NER0 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.02■□□□□ -0
TBC1D3FA6NER0 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.02■□□□□ -0
TBC1D3FA6NER0 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.02■□□□□ -0
TBC1D3FA6NER0 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.02■□□□□ -0
TBC1D3FA6NER0 AL451050.2-201ENST00000606967 682 ntBASIC15.02■□□□□ -0
TBC1D3FA6NER0 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.02■□□□□ -0
TBC1D3FA6NER0 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TBC1D3FA6NER0 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.02□□□□□ -0.01
TBC1D3FA6NER0 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.02□□□□□ -0.01
TBC1D3FA6NER0 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.02□□□□□ -0.01
TBC1D3FA6NER0 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TBC1D3FA6NER0 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.02□□□□□ -0.01
TBC1D3FA6NER0 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.02□□□□□ -0.01
TBC1D3FA6NER0 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TBC1D3FA6NER0 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TBC1D3FA6NER0 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.02□□□□□ -0.01
TBC1D3FA6NER0 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
TBC1D3FA6NER0 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms