Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 RPL13P2-201ENST00000440687 659 ntBASIC13.2□□□□□ -0.3
SHISA3A0PJX4 TIMM8BP1-201ENST00000452384 211 ntBASIC13.2□□□□□ -0.3
SHISA3A0PJX4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.2□□□□□ -0.3
SHISA3A0PJX4 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 AC068760.1-201ENST00000493579 1953 ntBASIC13.2□□□□□ -0.3
SHISA3A0PJX4 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 AL137783.1-201ENST00000623494 1896 ntBASIC13.19□□□□□ -0.3
SHISA3A0PJX4 AL591122.2-201ENST00000624125 1853 ntBASIC13.19□□□□□ -0.3
SHISA3A0PJX4 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 AC015922.1-201ENST00000421102 1152 ntBASIC13.19□□□□□ -0.3
SHISA3A0PJX4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 AC025048.3-201ENST00000590609 569 ntBASIC13.19□□□□□ -0.3
SHISA3A0PJX4 LINC01115-203ENST00000606068 577 ntBASIC13.19□□□□□ -0.3
SHISA3A0PJX4 RN7SL828P-201ENST00000607615 303 ntBASIC13.19□□□□□ -0.3
SHISA3A0PJX4 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 AC005702.4-201ENST00000618393 416 ntBASIC13.19□□□□□ -0.3
SHISA3A0PJX4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.19□□□□□ -0.3
SHISA3A0PJX4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.18□□□□□ -0.3
SHISA3A0PJX4 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SHISA3A0PJX4 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SHISA3A0PJX4 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
SHISA3A0PJX4 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.18□□□□□ -0.3
SHISA3A0PJX4 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.18□□□□□ -0.3
SHISA3A0PJX4 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SHISA3A0PJX4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SHISA3A0PJX4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SHISA3A0PJX4 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SHISA3A0PJX4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SHISA3A0PJX4 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SHISA3A0PJX4 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SHISA3A0PJX4 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SHISA3A0PJX4 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SHISA3A0PJX4 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms