Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 FUZ-207ENST00000526575 482 ntTSL 4 BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AC106886.1-201ENST00000568660 600 ntBASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AC010319.3-201ENST00000597028 470 ntBASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 PFAS-212ENST00000625942 396 ntTSL 5 BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AC084364.1-201ENST00000551967 1556 ntBASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AC007191.1-201ENST00000623179 2995 ntBASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 MIR658-201ENST00000385210 100 ntBASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 KRT18P64-201ENST00000434946 1219 ntBASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
TCRBV4S1A1TA0A5B7 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 SOCS2P1-201ENST00000417727 557 ntBASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms