Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 AC006449.6-201ENST00000612330 2296 ntBASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 FTH1P22-201ENST00000456305 520 ntBASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 DBP-202ENST00000593500 712 ntTSL 2 BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.08■□□□□ 0.49
ZC3H4Q9UPT8 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ZC3H4Q9UPT8 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ZC3H4Q9UPT8 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.08■□□□□ 0.49
ZC3H4Q9UPT8 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ZC3H4Q9UPT8 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
ZC3H4Q9UPT8 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ZC3H4Q9UPT8 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ZC3H4Q9UPT8 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ZC3H4Q9UPT8 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
ZC3H4Q9UPT8 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
ZC3H4Q9UPT8 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
ZC3H4Q9UPT8 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ZC3H4Q9UPT8 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ZC3H4Q9UPT8 AL807761.2-201ENST00000422849 729 ntBASIC18.08■□□□□ 0.49
ZC3H4Q9UPT8 TSPY25P-201ENST00000429463 745 ntBASIC18.08■□□□□ 0.49
ZC3H4Q9UPT8 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC18.08■□□□□ 0.49
ZC3H4Q9UPT8 AC084752.1-201ENST00000509766 622 ntBASIC18.08■□□□□ 0.49
ZC3H4Q9UPT8 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC18.08■□□□□ 0.49
ZC3H4Q9UPT8 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ZC3H4Q9UPT8 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZC3H4Q9UPT8 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZC3H4Q9UPT8 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZC3H4Q9UPT8 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.08■□□□□ 0.48
ZC3H4Q9UPT8 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZC3H4Q9UPT8 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZC3H4Q9UPT8 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ZC3H4Q9UPT8 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZC3H4Q9UPT8 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ZC3H4Q9UPT8 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZC3H4Q9UPT8 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZC3H4Q9UPT8 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ZC3H4Q9UPT8 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.08■□□□□ 0.48
ZC3H4Q9UPT8 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZC3H4Q9UPT8 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC18.07■□□□□ 0.48
ZC3H4Q9UPT8 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC18.07■□□□□ 0.48
ZC3H4Q9UPT8 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.07■□□□□ 0.48
ZC3H4Q9UPT8 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZC3H4Q9UPT8 AC136759.1-202ENST00000530858 2194 ntBASIC18.07■□□□□ 0.48
ZC3H4Q9UPT8 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.07■□□□□ 0.48
ZC3H4Q9UPT8 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC18.07■□□□□ 0.48
ZC3H4Q9UPT8 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ZC3H4Q9UPT8 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZC3H4Q9UPT8 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC18.07■□□□□ 0.48
ZC3H4Q9UPT8 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZC3H4Q9UPT8 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ZC3H4Q9UPT8 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZC3H4Q9UPT8 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.07■□□□□ 0.48
ZC3H4Q9UPT8 BANF1P3-201ENST00000412556 261 ntBASIC18.07■□□□□ 0.48
ZC3H4Q9UPT8 AC004837.1-201ENST00000446267 564 ntBASIC18.07■□□□□ 0.48
ZC3H4Q9UPT8 RPSAP15-201ENST00000448168 861 ntBASIC18.07■□□□□ 0.48
ZC3H4Q9UPT8 MRPL22P1-201ENST00000505398 616 ntBASIC18.07■□□□□ 0.48
ZC3H4Q9UPT8 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZC3H4Q9UPT8 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
ZC3H4Q9UPT8 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
ZC3H4Q9UPT8 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC18.07■□□□□ 0.48
ZC3H4Q9UPT8 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZC3H4Q9UPT8 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
ZC3H4Q9UPT8 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZC3H4Q9UPT8 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZC3H4Q9UPT8 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZC3H4Q9UPT8 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZC3H4Q9UPT8 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZC3H4Q9UPT8 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms