Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA4Q9UN74 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA4Q9UN74 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 AC067930.6-201ENST00000623257 4947 ntBASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 TPM3P8-201ENST00000330554 643 ntBASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 AC112492.5-201ENST00000421897 457 ntBASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 AL590640.2-201ENST00000457038 527 ntBASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 AC138466.3-201ENST00000619983 221 ntBASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 LINC02228-204ENST00000642115 2962 ntBASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHA4Q9UN74 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 AC023824.1-201ENST00000562945 2975 ntBASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 ARSEP1-201ENST00000420443 635 ntBASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 AC003102.2-201ENST00000589195 1469 ntBASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PCDHA4Q9UN74 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms