Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 HCG4-201ENST00000418983 998 ntBASIC18.11■□□□□ 0.49
RTN4Q9NQC3 SCARNA2-201ENST00000458748 420 ntBASIC18.11■□□□□ 0.49
RTN4Q9NQC3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 AL121772.3-201ENST00000610840 674 ntBASIC18.11■□□□□ 0.49
RTN4Q9NQC3 REXO1L6P-202ENST00000619970 1078 ntBASIC18.11■□□□□ 0.49
RTN4Q9NQC3 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 AC129492.6-201ENST00000611383 1305 ntBASIC18.11■□□□□ 0.49
RTN4Q9NQC3 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTN4Q9NQC3 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC18.1■□□□□ 0.49
RTN4Q9NQC3 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTN4Q9NQC3 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTN4Q9NQC3 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RTN4Q9NQC3 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RTN4Q9NQC3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RTN4Q9NQC3 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTN4Q9NQC3 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTN4Q9NQC3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RTN4Q9NQC3 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.1■□□□□ 0.49
RTN4Q9NQC3 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RTN4Q9NQC3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RTN4Q9NQC3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.1■□□□□ 0.49
RTN4Q9NQC3 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTN4Q9NQC3 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTN4Q9NQC3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTN4Q9NQC3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTN4Q9NQC3 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTN4Q9NQC3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RTN4Q9NQC3 AC073621.1-201ENST00000392730 636 ntBASIC18.1■□□□□ 0.49
RTN4Q9NQC3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTN4Q9NQC3 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC18.1■□□□□ 0.49
RTN4Q9NQC3 TSPY19P-201ENST00000418461 509 ntBASIC18.1■□□□□ 0.49
RTN4Q9NQC3 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.1■□□□□ 0.49
RTN4Q9NQC3 LAGE3P1-201ENST00000425356 484 ntBASIC18.1■□□□□ 0.49
RTN4Q9NQC3 TSPY18P-201ENST00000441642 509 ntBASIC18.1■□□□□ 0.49
RTN4Q9NQC3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RTN4Q9NQC3 RPS15P9-201ENST00000494093 319 ntBASIC18.1■□□□□ 0.49
RTN4Q9NQC3 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.1■□□□□ 0.49
RTN4Q9NQC3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
RTN4Q9NQC3 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.1■□□□□ 0.49
RTN4Q9NQC3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RTN4Q9NQC3 AC107918.4-202ENST00000641623 219 ntBASIC18.1■□□□□ 0.49
RTN4Q9NQC3 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTN4Q9NQC3 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC18.1■□□□□ 0.49
RTN4Q9NQC3 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC18.1■□□□□ 0.49
RTN4Q9NQC3 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTN4Q9NQC3 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RTN4Q9NQC3 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC18.1■□□□□ 0.49
RTN4Q9NQC3 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTN4Q9NQC3 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC18.1■□□□□ 0.49
RTN4Q9NQC3 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC18.1■□□□□ 0.49
RTN4Q9NQC3 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTN4Q9NQC3 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC18.09■□□□□ 0.49
RTN4Q9NQC3 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC18.09■□□□□ 0.49
RTN4Q9NQC3 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTN4Q9NQC3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTN4Q9NQC3 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RTN4Q9NQC3 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC18.09■□□□□ 0.49
RTN4Q9NQC3 AC020658.7-201ENST00000624274 2442 ntBASIC18.09■□□□□ 0.49
RTN4Q9NQC3 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RTN4Q9NQC3 AC092117.1-201ENST00000621230 3250 ntBASIC18.09■□□□□ 0.49
RTN4Q9NQC3 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RTN4Q9NQC3 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTN4Q9NQC3 AC102953.2-201ENST00000609755 3026 ntBASIC18.09■□□□□ 0.49
RTN4Q9NQC3 AKR1C7P-201ENST00000305623 895 ntBASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms