Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSU72Q9NP77 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSU72Q9NP77 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SSU72Q9NP77 AC023794.5-201ENST00000564380 2157 ntBASIC15.01□□□□□ -0.01
SSU72Q9NP77 RN7SL832P-201ENST00000607781 1756 ntBASIC15.01□□□□□ -0.01
SSU72Q9NP77 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSU72Q9NP77 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSU72Q9NP77 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SSU72Q9NP77 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSU72Q9NP77 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SSU72Q9NP77 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSU72Q9NP77 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSU72Q9NP77 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSU72Q9NP77 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SSU72Q9NP77 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.01□□□□□ -0.01
SSU72Q9NP77 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSU72Q9NP77 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSU72Q9NP77 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SSU72Q9NP77 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSU72Q9NP77 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SSU72Q9NP77 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.01□□□□□ -0.01
SSU72Q9NP77 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.01□□□□□ -0.01
SSU72Q9NP77 RBPMS2P1-201ENST00000437762 623 ntBASIC15.01□□□□□ -0.01
SSU72Q9NP77 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
SSU72Q9NP77 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.01□□□□□ -0.01
SSU72Q9NP77 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.01□□□□□ -0.01
SSU72Q9NP77 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.01□□□□□ -0.01
SSU72Q9NP77 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.01□□□□□ -0.01
SSU72Q9NP77 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.01□□□□□ -0.01
SSU72Q9NP77 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.01□□□□□ -0.01
SSU72Q9NP77 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.01□□□□□ -0.01
SSU72Q9NP77 BX640515.1-201ENST00000617215 977 ntBASIC15.01□□□□□ -0.01
SSU72Q9NP77 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.01□□□□□ -0.01
SSU72Q9NP77 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSU72Q9NP77 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SSU72Q9NP77 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SSU72Q9NP77 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SSU72Q9NP77 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SSU72Q9NP77 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSU72Q9NP77 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSU72Q9NP77 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSU72Q9NP77 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC15.01□□□□□ -0.01
SSU72Q9NP77 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSU72Q9NP77 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSU72Q9NP77 KRT8P14-201ENST00000414254 1442 ntBASIC15□□□□□ -0.01
SSU72Q9NP77 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSU72Q9NP77 PPT1-213ENST00000641319 2388 ntBASIC15□□□□□ -0.01
SSU72Q9NP77 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
SSU72Q9NP77 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSU72Q9NP77 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSU72Q9NP77 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSU72Q9NP77 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SSU72Q9NP77 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSU72Q9NP77 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC15□□□□□ -0.01
SSU72Q9NP77 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSU72Q9NP77 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SSU72Q9NP77 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSU72Q9NP77 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SSU72Q9NP77 TUBB3P1-201ENST00000405796 1332 ntBASIC15□□□□□ -0.01
SSU72Q9NP77 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSU72Q9NP77 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSU72Q9NP77 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSU72Q9NP77 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC15□□□□□ -0.01
SSU72Q9NP77 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSU72Q9NP77 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSU72Q9NP77 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSU72Q9NP77 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
SSU72Q9NP77 AL590627.1-203ENST00000421194 1026 ntBASIC15□□□□□ -0.01
SSU72Q9NP77 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
SSU72Q9NP77 AC004832.2-201ENST00000426397 482 ntBASIC15□□□□□ -0.01
SSU72Q9NP77 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15□□□□□ -0.01
SSU72Q9NP77 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSU72Q9NP77 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15□□□□□ -0.01
SSU72Q9NP77 MYADML-201ENST00000474610 2147 ntBASIC15□□□□□ -0.01
SSU72Q9NP77 SLC25A1P1-201ENST00000528351 927 ntBASIC15□□□□□ -0.01
SSU72Q9NP77 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSU72Q9NP77 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15□□□□□ -0.01
SSU72Q9NP77 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15□□□□□ -0.01
SSU72Q9NP77 AC093520.2-201ENST00000561830 333 ntBASIC15□□□□□ -0.01
SSU72Q9NP77 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15□□□□□ -0.01
SSU72Q9NP77 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15□□□□□ -0.01
SSU72Q9NP77 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15□□□□□ -0.01
SSU72Q9NP77 AC092364.2-202ENST00000597012 1073 ntBASIC15□□□□□ -0.01
SSU72Q9NP77 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSU72Q9NP77 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSU72Q9NP77 AL513210.1-201ENST00000629608 234 ntBASIC15□□□□□ -0.01
SSU72Q9NP77 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15□□□□□ -0.01
SSU72Q9NP77 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15□□□□□ -0.01
SSU72Q9NP77 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15□□□□□ -0.01
SSU72Q9NP77 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15□□□□□ -0.01
SSU72Q9NP77 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15□□□□□ -0.01
SSU72Q9NP77 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSU72Q9NP77 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SSU72Q9NP77 AC012617.1-204ENST00000586340 2305 ntBASIC15□□□□□ -0.01
SSU72Q9NP77 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSU72Q9NP77 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSU72Q9NP77 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSU72Q9NP77 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSU72Q9NP77 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
SSU72Q9NP77 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 188.1 ms