Protein–RNA interactions for Protein: Q9HB31

SEBOX, Homeobox protein SEBOX, humanhuman

Predicted RBP Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEBOXQ9HB31 AC004840.1-201ENST00000636359 365 ntBASIC12.96□□□□□ -0.33
SEBOXQ9HB31 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
SEBOXQ9HB31 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
SEBOXQ9HB31 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SEBOXQ9HB31 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SEBOXQ9HB31 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
SEBOXQ9HB31 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.96□□□□□ -0.34
SEBOXQ9HB31 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SEBOXQ9HB31 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SEBOXQ9HB31 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
SEBOXQ9HB31 AC023024.2-201ENST00000623561 1993 ntBASIC12.96□□□□□ -0.34
SEBOXQ9HB31 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SEBOXQ9HB31 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SEBOXQ9HB31 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SEBOXQ9HB31 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.96□□□□□ -0.34
SEBOXQ9HB31 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SEBOXQ9HB31 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SEBOXQ9HB31 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
SEBOXQ9HB31 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
SEBOXQ9HB31 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 MRPS18AP1-201ENST00000414458 589 ntBASIC12.95□□□□□ -0.34
SEBOXQ9HB31 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 AL390754.1-201ENST00000619088 582 ntBASIC12.95□□□□□ -0.34
SEBOXQ9HB31 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEBOXQ9HB31 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEBOXQ9HB31 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.94□□□□□ -0.34
SEBOXQ9HB31 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEBOXQ9HB31 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC12.94□□□□□ -0.34
SEBOXQ9HB31 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEBOXQ9HB31 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.94□□□□□ -0.34
SEBOXQ9HB31 SBF1P1-201ENST00000444527 5631 ntBASIC12.94□□□□□ -0.34
SEBOXQ9HB31 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SEBOXQ9HB31 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEBOXQ9HB31 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEBOXQ9HB31 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SEBOXQ9HB31 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEBOXQ9HB31 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SEBOXQ9HB31 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SEBOXQ9HB31 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SEBOXQ9HB31 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC12.94□□□□□ -0.34
SEBOXQ9HB31 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEBOXQ9HB31 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC12.94□□□□□ -0.34
SEBOXQ9HB31 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC12.94□□□□□ -0.34
SEBOXQ9HB31 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.94□□□□□ -0.34
SEBOXQ9HB31 RPL13AP25-201ENST00000484130 612 ntBASIC12.94□□□□□ -0.34
SEBOXQ9HB31 AC004066.1-201ENST00000502488 802 ntBASIC12.94□□□□□ -0.34
SEBOXQ9HB31 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
SEBOXQ9HB31 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SEBOXQ9HB31 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC12.94□□□□□ -0.34
SEBOXQ9HB31 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEBOXQ9HB31 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SEBOXQ9HB31 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEBOXQ9HB31 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEBOXQ9HB31 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SEBOXQ9HB31 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.94□□□□□ -0.34
SEBOXQ9HB31 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms