Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPF2Q9HAU5 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC18.67■□□□□ 0.58
UPF2Q9HAU5 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPF2Q9HAU5 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
UPF2Q9HAU5 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UPF2Q9HAU5 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPF2Q9HAU5 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPF2Q9HAU5 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPF2Q9HAU5 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.67■□□□□ 0.58
UPF2Q9HAU5 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.67■□□□□ 0.58
UPF2Q9HAU5 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.67■□□□□ 0.58
UPF2Q9HAU5 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.67■□□□□ 0.58
UPF2Q9HAU5 TPT1P11-201ENST00000458482 498 ntBASIC18.67■□□□□ 0.58
UPF2Q9HAU5 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.67■□□□□ 0.58
UPF2Q9HAU5 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC18.67■□□□□ 0.58
UPF2Q9HAU5 ALG1L8P-201ENST00000533887 760 ntBASIC18.67■□□□□ 0.58
UPF2Q9HAU5 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.67■□□□□ 0.58
UPF2Q9HAU5 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
UPF2Q9HAU5 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
UPF2Q9HAU5 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC18.67■□□□□ 0.58
UPF2Q9HAU5 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.67■□□□□ 0.58
UPF2Q9HAU5 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPF2Q9HAU5 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UPF2Q9HAU5 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPF2Q9HAU5 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPF2Q9HAU5 LILRP1-201ENST00000444199 1370 ntBASIC18.67■□□□□ 0.58
UPF2Q9HAU5 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPF2Q9HAU5 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPF2Q9HAU5 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
UPF2Q9HAU5 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UPF2Q9HAU5 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
UPF2Q9HAU5 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC18.66■□□□□ 0.58
UPF2Q9HAU5 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UPF2Q9HAU5 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPF2Q9HAU5 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPF2Q9HAU5 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPF2Q9HAU5 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPF2Q9HAU5 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPF2Q9HAU5 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPF2Q9HAU5 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
UPF2Q9HAU5 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.66■□□□□ 0.58
UPF2Q9HAU5 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPF2Q9HAU5 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.66■□□□□ 0.58
UPF2Q9HAU5 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.66■□□□□ 0.58
UPF2Q9HAU5 AC003101.2-201ENST00000612557 442 ntBASIC18.66■□□□□ 0.58
UPF2Q9HAU5 MIR6069-201ENST00000620069 79 ntBASIC18.66■□□□□ 0.58
UPF2Q9HAU5 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPF2Q9HAU5 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPF2Q9HAU5 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UPF2Q9HAU5 AL035456.1-201ENST00000456064 1369 ntBASIC18.66■□□□□ 0.58
UPF2Q9HAU5 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC18.66■□□□□ 0.58
UPF2Q9HAU5 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC18.66■□□□□ 0.58
UPF2Q9HAU5 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
UPF2Q9HAU5 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC18.66■□□□□ 0.58
UPF2Q9HAU5 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPF2Q9HAU5 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
UPF2Q9HAU5 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
UPF2Q9HAU5 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.65■□□□□ 0.58
UPF2Q9HAU5 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPF2Q9HAU5 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPF2Q9HAU5 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPF2Q9HAU5 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.65■□□□□ 0.58
UPF2Q9HAU5 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
UPF2Q9HAU5 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UPF2Q9HAU5 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
UPF2Q9HAU5 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UPF2Q9HAU5 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPF2Q9HAU5 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.65■□□□□ 0.58
UPF2Q9HAU5 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.65■□□□□ 0.58
UPF2Q9HAU5 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.65■□□□□ 0.58
UPF2Q9HAU5 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
UPF2Q9HAU5 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
UPF2Q9HAU5 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.65■□□□□ 0.58
UPF2Q9HAU5 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
UPF2Q9HAU5 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UPF2Q9HAU5 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
UPF2Q9HAU5 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UPF2Q9HAU5 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPF2Q9HAU5 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPF2Q9HAU5 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC18.65■□□□□ 0.58
UPF2Q9HAU5 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
UPF2Q9HAU5 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC18.65■□□□□ 0.58
UPF2Q9HAU5 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
UPF2Q9HAU5 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC18.65■□□□□ 0.58
UPF2Q9HAU5 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPF2Q9HAU5 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UPF2Q9HAU5 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPF2Q9HAU5 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
UPF2Q9HAU5 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
UPF2Q9HAU5 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
UPF2Q9HAU5 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC18.64■□□□□ 0.58
UPF2Q9HAU5 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
UPF2Q9HAU5 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UPF2Q9HAU5 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPF2Q9HAU5 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPF2Q9HAU5 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPF2Q9HAU5 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC18.64■□□□□ 0.57
UPF2Q9HAU5 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC18.64■□□□□ 0.57
UPF2Q9HAU5 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPF2Q9HAU5 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms