Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 TSEN15P1-201ENST00000423257 515 ntBASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 KLF2P3-201ENST00000451977 1087 ntBASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 AC125807.1-201ENST00000483097 614 ntBASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 AC134684.3-201ENST00000641758 218 ntBASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 AC079781.4-201ENST00000641908 219 ntBASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 AC109322.1-201ENST00000524499 1264 ntBASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 AC092865.5-201ENST00000545435 363 ntBASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 AL158211.3-201ENST00000607385 239 ntBASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 Z92544.3-201ENST00000624747 417 ntBASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 AC027601.5-201ENST00000624065 2482 ntBASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 LILRP1-201ENST00000444199 1370 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms