Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 CELP-203ENST00000624767 2414 ntTSL 5 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 AC026691.1-201ENST00000602502 2017 ntBASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 Z69890.1-201ENST00000382990 339 ntBASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 R3HDM2P2-201ENST00000401880 2116 ntBASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 AL357563.1-201ENST00000404728 395 ntBASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 TSPY25P-201ENST00000429463 745 ntBASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 LYPLA2P1-203ENST00000447689 696 ntBASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 FTH1P22-201ENST00000456305 520 ntBASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 AC018463.1-201ENST00000456674 917 ntBASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 AC003686.1-201ENST00000550956 1034 ntBASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 AL031713.1-201ENST00000564813 661 ntBASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 MIR5196-201ENST00000578146 115 ntBASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 AC007326.1-201ENST00000604539 458 ntBASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 AC105137.3-201ENST00000617588 984 ntBASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 AP001184.1-201ENST00000637936 376 ntBASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-1Q9BYQ7 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
KRTAP4-1Q9BYQ7 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
KRTAP4-1Q9BYQ7 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
KRTAP4-1Q9BYQ7 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
KRTAP4-1Q9BYQ7 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC7.67□□□□□ -1.18
KRTAP4-1Q9BYQ7 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
KRTAP4-1Q9BYQ7 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
KRTAP4-1Q9BYQ7 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
KRTAP4-1Q9BYQ7 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
KRTAP4-1Q9BYQ7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC7.67□□□□□ -1.18
KRTAP4-1Q9BYQ7 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
KRTAP4-1Q9BYQ7 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
KRTAP4-1Q9BYQ7 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC7.67□□□□□ -1.18
KRTAP4-1Q9BYQ7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
KRTAP4-1Q9BYQ7 API5-203ENST00000455725 2257 ntTSL 2 BASIC7.67□□□□□ -1.18
KRTAP4-1Q9BYQ7 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
KRTAP4-1Q9BYQ7 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
KRTAP4-1Q9BYQ7 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
KRTAP4-1Q9BYQ7 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC7.67□□□□□ -1.18
KRTAP4-1Q9BYQ7 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
KRTAP4-1Q9BYQ7 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
KRTAP4-1Q9BYQ7 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC7.67□□□□□ -1.18
KRTAP4-1Q9BYQ7 AC020658.6-201ENST00000623564 1870 ntBASIC7.67□□□□□ -1.18
KRTAP4-1Q9BYQ7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms