Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 OR2R1P-201ENST00000441404 914 ntBASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 OR52X1P-201ENST00000446117 914 ntBASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 SHMT1P1-201ENST00000419974 1312 ntBASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 MTA3-204ENST00000406911 2041 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 AIG1-203ENST00000367596 559 ntTSL 2 BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 OR7E115P-201ENST00000382617 1024 ntBASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 ALMS1P1-201ENST00000428767 921 ntBASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 RN7SL375P-201ENST00000492442 298 ntBASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 AC099328.1-201ENST00000498809 1030 ntBASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 RPL30-213ENST00000523172 274 ntTSL 5 BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 GABARAPL1-203ENST00000535576 792 ntTSL 5 BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 CACNA1C-IT3-201ENST00000542680 622 ntTSL 3 BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 AL136298.3-201ENST00000556746 445 ntBASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 RN7SL605P-201ENST00000577229 281 ntBASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 AC106782.5-201ENST00000616011 337 ntBASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 AC097474.1-201ENST00000506481 1371 ntBASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL25A1Q9BXS0 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 FAM226B-201ENST00000602508 1490 ntBASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 SPINK2-201ENST00000248701 613 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 IGFL4-201ENST00000377697 573 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms