Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS2Q99743 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS2Q99743 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS2Q99743 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS2Q99743 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.91□□□□□ -0.02
NPAS2Q99743 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.91□□□□□ -0.02
NPAS2Q99743 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.91□□□□□ -0.02
NPAS2Q99743 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.91□□□□□ -0.02
NPAS2Q99743 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS2Q99743 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS2Q99743 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.91□□□□□ -0.02
NPAS2Q99743 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
NPAS2Q99743 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.91□□□□□ -0.02
NPAS2Q99743 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.91□□□□□ -0.02
NPAS2Q99743 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.91□□□□□ -0.02
NPAS2Q99743 AC026979.3-201ENST00000607315 403 ntBASIC14.91□□□□□ -0.02
NPAS2Q99743 AC004790.1-201ENST00000612686 536 ntBASIC14.91□□□□□ -0.02
NPAS2Q99743 AC009118.2-201ENST00000613275 655 ntBASIC14.91□□□□□ -0.02
NPAS2Q99743 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
NPAS2Q99743 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS2Q99743 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
NPAS2Q99743 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS2Q99743 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.91□□□□□ -0.02
NPAS2Q99743 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
NPAS2Q99743 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
NPAS2Q99743 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS2Q99743 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS2Q99743 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.91□□□□□ -0.02
NPAS2Q99743 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS2Q99743 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS2Q99743 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS2Q99743 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
NPAS2Q99743 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS2Q99743 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
NPAS2Q99743 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS2Q99743 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.9□□□□□ -0.02
NPAS2Q99743 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.9□□□□□ -0.02
NPAS2Q99743 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.9□□□□□ -0.02
NPAS2Q99743 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS2Q99743 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS2Q99743 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS2Q99743 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
NPAS2Q99743 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS2Q99743 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
NPAS2Q99743 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS2Q99743 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS2Q99743 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.9□□□□□ -0.02
NPAS2Q99743 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
NPAS2Q99743 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.9□□□□□ -0.02
NPAS2Q99743 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
NPAS2Q99743 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.9□□□□□ -0.02
NPAS2Q99743 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS2Q99743 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.9□□□□□ -0.02
NPAS2Q99743 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS2Q99743 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS2Q99743 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS2Q99743 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.9□□□□□ -0.02
NPAS2Q99743 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS2Q99743 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS2Q99743 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS2Q99743 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS2Q99743 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS2Q99743 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS2Q99743 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS2Q99743 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
NPAS2Q99743 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.9□□□□□ -0.02
NPAS2Q99743 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS2Q99743 ZNF890P-202ENST00000530367 1156 ntBASIC14.9□□□□□ -0.02
NPAS2Q99743 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS2Q99743 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.9□□□□□ -0.02
NPAS2Q99743 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.9□□□□□ -0.02
NPAS2Q99743 AF228730.6-201ENST00000641497 218 ntBASIC14.9□□□□□ -0.02
NPAS2Q99743 AC084121.3-201ENST00000641716 218 ntBASIC14.9□□□□□ -0.02
NPAS2Q99743 AC105233.6-201ENST00000642093 218 ntBASIC14.9□□□□□ -0.02
NPAS2Q99743 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS2Q99743 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS2Q99743 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS2Q99743 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS2Q99743 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
NPAS2Q99743 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS2Q99743 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS2Q99743 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
NPAS2Q99743 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS2Q99743 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS2Q99743 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS2Q99743 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS2Q99743 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.9□□□□□ -0.02
NPAS2Q99743 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS2Q99743 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS2Q99743 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NPAS2Q99743 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS2Q99743 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS2Q99743 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS2Q99743 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NPAS2Q99743 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS2Q99743 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NPAS2Q99743 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NPAS2Q99743 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS2Q99743 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS2Q99743 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms