Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
S1PR3Q99500 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
S1PR3Q99500 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
S1PR3Q99500 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
S1PR3Q99500 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
S1PR3Q99500 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
S1PR3Q99500 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.57□□□□□ -0.4
S1PR3Q99500 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
S1PR3Q99500 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.57□□□□□ -0.4
S1PR3Q99500 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
S1PR3Q99500 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
S1PR3Q99500 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
S1PR3Q99500 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.57□□□□□ -0.4
S1PR3Q99500 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC12.57□□□□□ -0.4
S1PR3Q99500 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
S1PR3Q99500 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC12.57□□□□□ -0.4
S1PR3Q99500 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC12.57□□□□□ -0.4
S1PR3Q99500 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC12.57□□□□□ -0.4
S1PR3Q99500 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC12.57□□□□□ -0.4
S1PR3Q99500 AC004066.1-201ENST00000502488 802 ntBASIC12.57□□□□□ -0.4
S1PR3Q99500 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC12.57□□□□□ -0.4
S1PR3Q99500 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC12.57□□□□□ -0.4
S1PR3Q99500 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
S1PR3Q99500 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.57□□□□□ -0.4
S1PR3Q99500 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
S1PR3Q99500 AC135586.1-201ENST00000539323 574 ntBASIC12.57□□□□□ -0.4
S1PR3Q99500 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
S1PR3Q99500 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.57□□□□□ -0.4
S1PR3Q99500 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.57□□□□□ -0.4
S1PR3Q99500 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
S1PR3Q99500 INO80C-206ENST00000586489 594 ntTSL 3 BASIC12.57□□□□□ -0.4
S1PR3Q99500 AC008738.7-201ENST00000609744 511 ntBASIC12.57□□□□□ -0.4
S1PR3Q99500 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.57□□□□□ -0.4
S1PR3Q99500 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
S1PR3Q99500 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
S1PR3Q99500 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
S1PR3Q99500 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
S1PR3Q99500 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC12.57□□□□□ -0.4
S1PR3Q99500 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
S1PR3Q99500 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
S1PR3Q99500 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
S1PR3Q99500 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
S1PR3Q99500 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.57□□□□□ -0.4
S1PR3Q99500 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
S1PR3Q99500 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
S1PR3Q99500 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.57□□□□□ -0.4
S1PR3Q99500 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
S1PR3Q99500 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
S1PR3Q99500 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.57□□□□□ -0.4
S1PR3Q99500 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
S1PR3Q99500 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
S1PR3Q99500 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
S1PR3Q99500 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
S1PR3Q99500 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
S1PR3Q99500 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
S1PR3Q99500 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
S1PR3Q99500 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
S1PR3Q99500 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
S1PR3Q99500 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.57□□□□□ -0.4
S1PR3Q99500 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.57□□□□□ -0.4
S1PR3Q99500 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
S1PR3Q99500 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
S1PR3Q99500 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
S1PR3Q99500 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
S1PR3Q99500 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.56□□□□□ -0.4
S1PR3Q99500 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.56□□□□□ -0.4
S1PR3Q99500 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.56□□□□□ -0.4
S1PR3Q99500 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
S1PR3Q99500 AP000845.1-201ENST00000581677 2131 ntBASIC12.56□□□□□ -0.4
S1PR3Q99500 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.56□□□□□ -0.4
S1PR3Q99500 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
S1PR3Q99500 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
S1PR3Q99500 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
S1PR3Q99500 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.56□□□□□ -0.4
S1PR3Q99500 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
S1PR3Q99500 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
S1PR3Q99500 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
S1PR3Q99500 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
S1PR3Q99500 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.56□□□□□ -0.4
S1PR3Q99500 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
S1PR3Q99500 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
S1PR3Q99500 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
S1PR3Q99500 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.56□□□□□ -0.4
S1PR3Q99500 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
S1PR3Q99500 MRPS18AP1-201ENST00000414458 589 ntBASIC12.56□□□□□ -0.4
S1PR3Q99500 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.56□□□□□ -0.4
S1PR3Q99500 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
S1PR3Q99500 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC12.56□□□□□ -0.4
S1PR3Q99500 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
S1PR3Q99500 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC12.56□□□□□ -0.4
S1PR3Q99500 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
S1PR3Q99500 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.56□□□□□ -0.4
S1PR3Q99500 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.56□□□□□ -0.4
S1PR3Q99500 AJ011932.1-201ENST00000621707 465 ntBASIC12.56□□□□□ -0.4
S1PR3Q99500 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
S1PR3Q99500 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
S1PR3Q99500 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.56□□□□□ -0.4
S1PR3Q99500 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
S1PR3Q99500 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
S1PR3Q99500 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms