Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AL132655.2-201ENST00000596276 594 ntBASIC14.39□□□□□ -0.11
COL21A1Q96P44 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.39□□□□□ -0.11
COL21A1Q96P44 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL21A1Q96P44 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.39□□□□□ -0.11
COL21A1Q96P44 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL21A1Q96P44 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.39□□□□□ -0.11
COL21A1Q96P44 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COL21A1Q96P44 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL21A1Q96P44 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
COL21A1Q96P44 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL21A1Q96P44 AP000845.1-201ENST00000581677 2131 ntBASIC14.39□□□□□ -0.11
COL21A1Q96P44 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL21A1Q96P44 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COL21A1Q96P44 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.39□□□□□ -0.11
COL21A1Q96P44 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL21A1Q96P44 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL21A1Q96P44 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
COL21A1Q96P44 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COL21A1Q96P44 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
COL21A1Q96P44 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL21A1Q96P44 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
COL21A1Q96P44 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
COL21A1Q96P44 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL21A1Q96P44 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL21A1Q96P44 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.38□□□□□ -0.11
COL21A1Q96P44 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL21A1Q96P44 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL21A1Q96P44 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL21A1Q96P44 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.38□□□□□ -0.11
COL21A1Q96P44 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
COL21A1Q96P44 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.38□□□□□ -0.11
COL21A1Q96P44 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
COL21A1Q96P44 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
COL21A1Q96P44 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL21A1Q96P44 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
COL21A1Q96P44 SLC7A15P-201ENST00000424028 1363 ntBASIC14.38□□□□□ -0.11
COL21A1Q96P44 AL391825.1-201ENST00000457671 1364 ntBASIC14.38□□□□□ -0.11
COL21A1Q96P44 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL21A1Q96P44 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL21A1Q96P44 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.38□□□□□ -0.11
COL21A1Q96P44 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.38□□□□□ -0.11
COL21A1Q96P44 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL21A1Q96P44 AC087499.6-201ENST00000411576 835 ntBASIC14.38□□□□□ -0.11
COL21A1Q96P44 PIN1P1-201ENST00000412108 996 ntBASIC14.38□□□□□ -0.11
COL21A1Q96P44 AL353779.1-201ENST00000434793 351 ntBASIC14.38□□□□□ -0.11
COL21A1Q96P44 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL21A1Q96P44 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.38□□□□□ -0.11
COL21A1Q96P44 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.38□□□□□ -0.11
COL21A1Q96P44 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.38□□□□□ -0.11
COL21A1Q96P44 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.38□□□□□ -0.11
COL21A1Q96P44 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.38□□□□□ -0.11
COL21A1Q96P44 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL21A1Q96P44 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.38□□□□□ -0.11
COL21A1Q96P44 AC099568.2-201ENST00000609194 695 ntBASIC14.38□□□□□ -0.11
COL21A1Q96P44 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.38□□□□□ -0.11
COL21A1Q96P44 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL21A1Q96P44 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
COL21A1Q96P44 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL21A1Q96P44 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.38□□□□□ -0.11
COL21A1Q96P44 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL21A1Q96P44 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL21A1Q96P44 REXO1L2P-201ENST00000425429 2069 ntBASIC14.38□□□□□ -0.11
COL21A1Q96P44 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL21A1Q96P44 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.38□□□□□ -0.11
COL21A1Q96P44 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL21A1Q96P44 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
COL21A1Q96P44 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
COL21A1Q96P44 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL21A1Q96P44 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL21A1Q96P44 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL21A1Q96P44 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
COL21A1Q96P44 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
COL21A1Q96P44 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COL21A1Q96P44 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL21A1Q96P44 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL21A1Q96P44 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.37□□□□□ -0.11
COL21A1Q96P44 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
COL21A1Q96P44 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL21A1Q96P44 AC140479.7-201ENST00000636301 2332 ntBASIC14.37□□□□□ -0.11
COL21A1Q96P44 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL21A1Q96P44 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
COL21A1Q96P44 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
COL21A1Q96P44 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL21A1Q96P44 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.37□□□□□ -0.11
COL21A1Q96P44 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
COL21A1Q96P44 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL21A1Q96P44 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.37□□□□□ -0.11
COL21A1Q96P44 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL21A1Q96P44 INTS4P1-203ENST00000641008 3683 ntBASIC14.37□□□□□ -0.11
COL21A1Q96P44 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COL21A1Q96P44 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COL21A1Q96P44 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.37□□□□□ -0.11
COL21A1Q96P44 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.37□□□□□ -0.11
COL21A1Q96P44 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COL21A1Q96P44 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.37□□□□□ -0.11
COL21A1Q96P44 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL21A1Q96P44 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.37□□□□□ -0.11
COL21A1Q96P44 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL21A1Q96P44 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.37□□□□□ -0.11
COL21A1Q96P44 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms