Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNED1Q8TER0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.04■□□□□ 0.48
SNED1Q8TER0 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNED1Q8TER0 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC18.04■□□□□ 0.48
SNED1Q8TER0 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SNED1Q8TER0 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNED1Q8TER0 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNED1Q8TER0 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNED1Q8TER0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNED1Q8TER0 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNED1Q8TER0 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.04■□□□□ 0.48
SNED1Q8TER0 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNED1Q8TER0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNED1Q8TER0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SNED1Q8TER0 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNED1Q8TER0 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
SNED1Q8TER0 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC18.04■□□□□ 0.48
SNED1Q8TER0 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SNED1Q8TER0 PTPA-215ENST00000432124 567 ntTSL 4 BASIC18.04■□□□□ 0.48
SNED1Q8TER0 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC18.04■□□□□ 0.48
SNED1Q8TER0 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC18.04■□□□□ 0.48
SNED1Q8TER0 POLD4-208ENST00000532830 904 ntTSL 3 BASIC18.04■□□□□ 0.48
SNED1Q8TER0 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC18.04■□□□□ 0.48
SNED1Q8TER0 AC003686.1-201ENST00000550956 1034 ntBASIC18.04■□□□□ 0.48
SNED1Q8TER0 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNED1Q8TER0 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNED1Q8TER0 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC18.04■□□□□ 0.48
SNED1Q8TER0 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC18.04■□□□□ 0.48
SNED1Q8TER0 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC18.04■□□□□ 0.48
SNED1Q8TER0 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SNED1Q8TER0 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC18.04■□□□□ 0.48
SNED1Q8TER0 AC090502.4-201ENST00000551714 1386 ntBASIC18.04■□□□□ 0.48
SNED1Q8TER0 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNED1Q8TER0 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNED1Q8TER0 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
SNED1Q8TER0 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC18.04■□□□□ 0.48
SNED1Q8TER0 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SNED1Q8TER0 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.03■□□□□ 0.48
SNED1Q8TER0 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNED1Q8TER0 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SNED1Q8TER0 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC18.03■□□□□ 0.48
SNED1Q8TER0 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.03■□□□□ 0.48
SNED1Q8TER0 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SNED1Q8TER0 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
SNED1Q8TER0 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNED1Q8TER0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNED1Q8TER0 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNED1Q8TER0 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.03■□□□□ 0.48
SNED1Q8TER0 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.03■□□□□ 0.48
SNED1Q8TER0 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNED1Q8TER0 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNED1Q8TER0 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SNED1Q8TER0 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SNED1Q8TER0 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SNED1Q8TER0 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SNED1Q8TER0 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SNED1Q8TER0 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC18.03■□□□□ 0.48
SNED1Q8TER0 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SNED1Q8TER0 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC18.03■□□□□ 0.48
SNED1Q8TER0 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC18.03■□□□□ 0.48
SNED1Q8TER0 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC18.03■□□□□ 0.48
SNED1Q8TER0 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
SNED1Q8TER0 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNED1Q8TER0 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SNED1Q8TER0 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
SNED1Q8TER0 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.03■□□□□ 0.48
SNED1Q8TER0 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNED1Q8TER0 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SNED1Q8TER0 AC112693.3-201ENST00000624819 1983 ntBASIC18.03■□□□□ 0.48
SNED1Q8TER0 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.03■□□□□ 0.48
SNED1Q8TER0 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC18.03■□□□□ 0.48
SNED1Q8TER0 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNED1Q8TER0 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.03■□□□□ 0.48
SNED1Q8TER0 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.03■□□□□ 0.48
SNED1Q8TER0 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SNED1Q8TER0 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNED1Q8TER0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
SNED1Q8TER0 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNED1Q8TER0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
SNED1Q8TER0 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNED1Q8TER0 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNED1Q8TER0 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
SNED1Q8TER0 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNED1Q8TER0 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC18.02■□□□□ 0.48
SNED1Q8TER0 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC18.02■□□□□ 0.48
SNED1Q8TER0 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC18.02■□□□□ 0.48
SNED1Q8TER0 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNED1Q8TER0 MIR1227-201ENST00000408484 88 ntBASIC18.02■□□□□ 0.48
SNED1Q8TER0 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SNED1Q8TER0 AL807761.2-201ENST00000422849 729 ntBASIC18.02■□□□□ 0.48
SNED1Q8TER0 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC18.02■□□□□ 0.48
SNED1Q8TER0 BUD31-205ENST00000456893 512 ntTSL 5 BASIC18.02■□□□□ 0.48
SNED1Q8TER0 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC18.02■□□□□ 0.48
SNED1Q8TER0 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC18.02■□□□□ 0.48
SNED1Q8TER0 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC18.02■□□□□ 0.48
SNED1Q8TER0 AL022334.2-201ENST00000610000 484 ntBASIC18.02■□□□□ 0.48
SNED1Q8TER0 AP001184.1-201ENST00000637936 376 ntBASIC18.02■□□□□ 0.48
SNED1Q8TER0 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SNED1Q8TER0 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNED1Q8TER0 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms