Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 MIR1224-201ENST00000408193 85 ntBASIC13.17□□□□□ -0.3
BEST4Q8NFU0 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 AP002472.1-201ENST00000577490 586 ntBASIC13.17□□□□□ -0.3
BEST4Q8NFU0 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 AC027307.2-201ENST00000591252 911 ntBASIC13.17□□□□□ -0.3
BEST4Q8NFU0 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 AC099522.2-201ENST00000607001 744 ntBASIC13.17□□□□□ -0.3
BEST4Q8NFU0 AC026979.3-201ENST00000607315 403 ntBASIC13.17□□□□□ -0.3
BEST4Q8NFU0 AC064836.3-201ENST00000607928 673 ntBASIC13.17□□□□□ -0.3
BEST4Q8NFU0 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 AC008267.7-201ENST00000624570 1194 ntBASIC13.17□□□□□ -0.3
BEST4Q8NFU0 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.17□□□□□ -0.3
BEST4Q8NFU0 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 AKAP8P1-201ENST00000434743 1349 ntBASIC13.16□□□□□ -0.3
BEST4Q8NFU0 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 AC015802.1-201ENST00000588104 1449 ntBASIC13.16□□□□□ -0.3
BEST4Q8NFU0 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 AC142381.1-201ENST00000426099 345 ntBASIC13.16□□□□□ -0.3
BEST4Q8NFU0 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms