Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
VPS37AQ8NEZ2 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.52□□□□□ -0.08
VPS37AQ8NEZ2 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
VPS37AQ8NEZ2 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.52□□□□□ -0.08
VPS37AQ8NEZ2 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VPS37AQ8NEZ2 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VPS37AQ8NEZ2 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.52□□□□□ -0.09
VPS37AQ8NEZ2 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.09
VPS37AQ8NEZ2 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.52□□□□□ -0.09
VPS37AQ8NEZ2 DNAJB3-202ENST00000449667 1266 ntBASIC14.52□□□□□ -0.09
VPS37AQ8NEZ2 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.52□□□□□ -0.09
VPS37AQ8NEZ2 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.52□□□□□ -0.09
VPS37AQ8NEZ2 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
VPS37AQ8NEZ2 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.52□□□□□ -0.09
VPS37AQ8NEZ2 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VPS37AQ8NEZ2 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.52□□□□□ -0.09
VPS37AQ8NEZ2 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.52□□□□□ -0.09
VPS37AQ8NEZ2 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
VPS37AQ8NEZ2 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.52□□□□□ -0.09
VPS37AQ8NEZ2 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.52□□□□□ -0.09
VPS37AQ8NEZ2 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VPS37AQ8NEZ2 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VPS37AQ8NEZ2 AC015656.1-201ENST00000624209 3578 ntBASIC14.52□□□□□ -0.09
VPS37AQ8NEZ2 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VPS37AQ8NEZ2 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.52□□□□□ -0.09
VPS37AQ8NEZ2 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VPS37AQ8NEZ2 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.09
VPS37AQ8NEZ2 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.52□□□□□ -0.09
VPS37AQ8NEZ2 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
VPS37AQ8NEZ2 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VPS37AQ8NEZ2 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VPS37AQ8NEZ2 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
VPS37AQ8NEZ2 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 AC018442.1-201ENST00000421439 2061 ntBASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 LILRP1-201ENST00000444199 1370 ntBASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 AC044860.1-202ENST00000559481 777 ntBASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
VPS37AQ8NEZ2 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS37AQ8NEZ2 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS37AQ8NEZ2 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS37AQ8NEZ2 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
VPS37AQ8NEZ2 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
VPS37AQ8NEZ2 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
VPS37AQ8NEZ2 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS37AQ8NEZ2 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.5□□□□□ -0.09
VPS37AQ8NEZ2 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.5□□□□□ -0.09
VPS37AQ8NEZ2 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms