Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 AP001542.1-201ENST00000591314 200 ntBASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 AC133539.2-201ENST00000604757 467 ntBASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 AC008494.3-201ENST00000606615 944 ntBASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 BX539320.1-201ENST00000623759 877 ntBASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 KRT8P22-201ENST00000562317 1415 ntBASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 CICP14-201ENST00000629111 2732 ntBASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 AL645937.2-201ENST00000396808 931 ntBASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 AL035696.2-201ENST00000407941 709 ntBASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 HMGN1P19-201ENST00000436976 333 ntBASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 ELK1P1-201ENST00000485699 580 ntBASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 TERF1P3-201ENST00000505638 1227 ntBASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 AP001582.1-201ENST00000525856 295 ntBASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 SPDYE22P-201ENST00000582158 798 ntBASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 BNIP3P41-202ENST00000616656 861 ntBASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCDC116Q8IYX3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.33□□□□□ -0.11
CCDC116Q8IYX3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
CCDC116Q8IYX3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.33□□□□□ -0.11
CCDC116Q8IYX3 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
CCDC116Q8IYX3 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC116Q8IYX3 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
CCDC116Q8IYX3 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC116Q8IYX3 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC116Q8IYX3 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC116Q8IYX3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC116Q8IYX3 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC116Q8IYX3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms