Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 HCG27-204ENST00000424675 895 ntTSL 3 BASIC17.93■□□□□ 0.46
SLX4Q8IY92 KRT17P4-201ENST00000429445 819 ntBASIC17.93■□□□□ 0.46
SLX4Q8IY92 FAU-202ENST00000434372 533 ntTSL 2 BASIC17.93■□□□□ 0.46
SLX4Q8IY92 ERP29P1-201ENST00000442902 706 ntBASIC17.93■□□□□ 0.46
SLX4Q8IY92 RPS23-204ENST00000507980 836 ntTSL 2 BASIC17.93■□□□□ 0.46
SLX4Q8IY92 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC17.93■□□□□ 0.46
SLX4Q8IY92 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLX4Q8IY92 HERC2P11-201ENST00000562845 725 ntBASIC17.93■□□□□ 0.46
SLX4Q8IY92 AC100756.2-201ENST00000569537 736 ntBASIC17.93■□□□□ 0.46
SLX4Q8IY92 RN7SL665P-201ENST00000578793 300 ntBASIC17.93■□□□□ 0.46
SLX4Q8IY92 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC17.93■□□□□ 0.46
SLX4Q8IY92 AP000322.3-201ENST00000608665 388 ntBASIC17.93■□□□□ 0.46
SLX4Q8IY92 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC17.93■□□□□ 0.46
SLX4Q8IY92 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLX4Q8IY92 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLX4Q8IY92 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLX4Q8IY92 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLX4Q8IY92 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLX4Q8IY92 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SLX4Q8IY92 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLX4Q8IY92 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.93■□□□□ 0.46
SLX4Q8IY92 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.93■□□□□ 0.46
SLX4Q8IY92 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.93■□□□□ 0.46
SLX4Q8IY92 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.93■□□□□ 0.46
SLX4Q8IY92 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLX4Q8IY92 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLX4Q8IY92 API5-208ENST00000531273 1868 ntTSL 2 BASIC17.92■□□□□ 0.46
SLX4Q8IY92 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.92■□□□□ 0.46
SLX4Q8IY92 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.92■□□□□ 0.46
SLX4Q8IY92 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLX4Q8IY92 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLX4Q8IY92 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLX4Q8IY92 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLX4Q8IY92 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLX4Q8IY92 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SLX4Q8IY92 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC17.92■□□□□ 0.46
SLX4Q8IY92 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLX4Q8IY92 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC17.92■□□□□ 0.46
SLX4Q8IY92 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC17.92■□□□□ 0.46
SLX4Q8IY92 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLX4Q8IY92 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SLX4Q8IY92 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.92■□□□□ 0.46
SLX4Q8IY92 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC17.92■□□□□ 0.46
SLX4Q8IY92 EIF5AP2-201ENST00000585668 1047 ntBASIC17.92■□□□□ 0.46
SLX4Q8IY92 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC17.92■□□□□ 0.46
SLX4Q8IY92 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLX4Q8IY92 AC011471.3-201ENST00000623576 402 ntBASIC17.92■□□□□ 0.46
SLX4Q8IY92 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLX4Q8IY92 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLX4Q8IY92 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.92■□□□□ 0.46
SLX4Q8IY92 AL391005.1-201ENST00000623953 2435 ntBASIC17.92■□□□□ 0.46
SLX4Q8IY92 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLX4Q8IY92 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC17.92■□□□□ 0.46
SLX4Q8IY92 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLX4Q8IY92 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLX4Q8IY92 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLX4Q8IY92 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLX4Q8IY92 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLX4Q8IY92 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLX4Q8IY92 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLX4Q8IY92 AC084018.2-201ENST00000613093 2607 ntBASIC17.91■□□□□ 0.46
SLX4Q8IY92 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLX4Q8IY92 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLX4Q8IY92 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLX4Q8IY92 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SLX4Q8IY92 BCAS2P2-201ENST00000425064 674 ntBASIC17.91■□□□□ 0.46
SLX4Q8IY92 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLX4Q8IY92 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLX4Q8IY92 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC17.91■□□□□ 0.46
SLX4Q8IY92 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC17.91■□□□□ 0.46
SLX4Q8IY92 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
SLX4Q8IY92 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC17.91■□□□□ 0.46
SLX4Q8IY92 AC002472.4-201ENST00000641915 272 ntBASIC17.91■□□□□ 0.46
SLX4Q8IY92 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLX4Q8IY92 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLX4Q8IY92 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.91■□□□□ 0.46
SLX4Q8IY92 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC17.91■□□□□ 0.46
SLX4Q8IY92 MROH4P-201ENST00000431302 1578 ntBASIC17.91■□□□□ 0.46
SLX4Q8IY92 AP002353.1-201ENST00000528257 1599 ntBASIC17.91■□□□□ 0.46
SLX4Q8IY92 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.91■□□□□ 0.46
SLX4Q8IY92 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLX4Q8IY92 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC17.91■□□□□ 0.46
SLX4Q8IY92 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLX4Q8IY92 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SLX4Q8IY92 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLX4Q8IY92 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLX4Q8IY92 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLX4Q8IY92 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SLX4Q8IY92 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.91■□□□□ 0.46
SLX4Q8IY92 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLX4Q8IY92 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLX4Q8IY92 MIR645-201ENST00000385283 94 ntBASIC17.91■□□□□ 0.46
SLX4Q8IY92 AQP7P5-201ENST00000428759 1049 ntBASIC17.91■□□□□ 0.46
SLX4Q8IY92 GCSHP3-201ENST00000431120 391 ntBASIC17.91■□□□□ 0.46
SLX4Q8IY92 AQP7P4-201ENST00000447083 1042 ntBASIC17.91■□□□□ 0.46
SLX4Q8IY92 AQP7P2-201ENST00000453967 1041 ntBASIC17.91■□□□□ 0.46
SLX4Q8IY92 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC17.91■□□□□ 0.46
SLX4Q8IY92 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC17.91■□□□□ 0.46
SLX4Q8IY92 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC17.91■□□□□ 0.46
SLX4Q8IY92 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms