Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 FAM185BP-201ENST00000443595 716 ntBASIC12.65□□□□□ -0.38
ZNF546Q86UE3 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 AC073648.2-201ENST00000510116 352 ntBASIC12.65□□□□□ -0.38
ZNF546Q86UE3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 AC091304.2-201ENST00000564639 760 ntBASIC12.65□□□□□ -0.38
ZNF546Q86UE3 AL031432.2-201ENST00000566714 459 ntBASIC12.65□□□□□ -0.38
ZNF546Q86UE3 AL928711.1-201ENST00000570165 459 ntBASIC12.65□□□□□ -0.38
ZNF546Q86UE3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 ACTL9-202ENST00000612068 1252 ntBASIC12.65□□□□□ -0.38
ZNF546Q86UE3 AC005593.1-201ENST00000624894 515 ntBASIC12.65□□□□□ -0.38
ZNF546Q86UE3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF546Q86UE3 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
ZNF546Q86UE3 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
ZNF546Q86UE3 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms