Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 AC005498.2-205ENST00000593218 784 ntBASIC14.1□□□□□ -0.15
TUBA1AQ71U36 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 AL390955.2-201ENST00000603032 514 ntBASIC14.1□□□□□ -0.15
TUBA1AQ71U36 AL355385.1-201ENST00000606123 409 ntBASIC14.1□□□□□ -0.15
TUBA1AQ71U36 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 AC011700.1-201ENST00000610409 2627 ntBASIC14.1□□□□□ -0.15
TUBA1AQ71U36 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 AC134407.2-201ENST00000625089 1978 ntBASIC14.09□□□□□ -0.15
TUBA1AQ71U36 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 COL6A4P2-202ENST00000504443 2753 ntBASIC14.09□□□□□ -0.15
TUBA1AQ71U36 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 AC027369.6-201ENST00000525520 931 ntBASIC14.09□□□□□ -0.15
TUBA1AQ71U36 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 AL133215.2-201ENST00000609242 977 ntBASIC14.09□□□□□ -0.15
TUBA1AQ71U36 AL138828.2-201ENST00000615812 383 ntBASIC14.09□□□□□ -0.15
TUBA1AQ71U36 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 AC113367.3-201ENST00000508316 1912 ntBASIC14.09□□□□□ -0.15
TUBA1AQ71U36 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1AQ71U36 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
TUBA1AQ71U36 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TUBA1AQ71U36 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
TUBA1AQ71U36 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TUBA1AQ71U36 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
TUBA1AQ71U36 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
TUBA1AQ71U36 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
TUBA1AQ71U36 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
TUBA1AQ71U36 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TUBA1AQ71U36 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TUBA1AQ71U36 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TUBA1AQ71U36 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TUBA1AQ71U36 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.08□□□□□ -0.16
TUBA1AQ71U36 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC14.08□□□□□ -0.16
TUBA1AQ71U36 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.08□□□□□ -0.16
TUBA1AQ71U36 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
TUBA1AQ71U36 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TUBA1AQ71U36 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TUBA1AQ71U36 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TUBA1AQ71U36 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TUBA1AQ71U36 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TUBA1AQ71U36 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TUBA1AQ71U36 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
TUBA1AQ71U36 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.08□□□□□ -0.16
TUBA1AQ71U36 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.08□□□□□ -0.16
TUBA1AQ71U36 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms