Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 LINC01230-201ENST00000625222 3017 ntBASIC15.31■□□□□ 0.04
RAPH1Q70E73 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAPH1Q70E73 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RAPH1Q70E73 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAPH1Q70E73 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
RAPH1Q70E73 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RAPH1Q70E73 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RAPH1Q70E73 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAPH1Q70E73 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAPH1Q70E73 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RAPH1Q70E73 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAPH1Q70E73 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAPH1Q70E73 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.31■□□□□ 0.04
RAPH1Q70E73 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAPH1Q70E73 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.31■□□□□ 0.04
RAPH1Q70E73 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.31■□□□□ 0.04
RAPH1Q70E73 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.31■□□□□ 0.04
RAPH1Q70E73 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.31■□□□□ 0.04
RAPH1Q70E73 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.31■□□□□ 0.04
RAPH1Q70E73 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.31■□□□□ 0.04
RAPH1Q70E73 AL512361.1-201ENST00000554200 418 ntBASIC15.31■□□□□ 0.04
RAPH1Q70E73 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAPH1Q70E73 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.31■□□□□ 0.04
RAPH1Q70E73 TEX28P1-201ENST00000613479 1221 ntBASIC15.31■□□□□ 0.04
RAPH1Q70E73 TEX28P2-201ENST00000617764 1221 ntBASIC15.31■□□□□ 0.04
RAPH1Q70E73 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.31■□□□□ 0.04
RAPH1Q70E73 AL109936.8-201ENST00000641772 604 ntBASIC15.31■□□□□ 0.04
RAPH1Q70E73 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAPH1Q70E73 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAPH1Q70E73 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAPH1Q70E73 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.31■□□□□ 0.04
RAPH1Q70E73 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAPH1Q70E73 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.31■□□□□ 0.04
RAPH1Q70E73 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.31■□□□□ 0.04
RAPH1Q70E73 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.31■□□□□ 0.04
RAPH1Q70E73 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAPH1Q70E73 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAPH1Q70E73 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RAPH1Q70E73 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAPH1Q70E73 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RAPH1Q70E73 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAPH1Q70E73 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAPH1Q70E73 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAPH1Q70E73 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RAPH1Q70E73 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAPH1Q70E73 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.3■□□□□ 0.04
RAPH1Q70E73 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAPH1Q70E73 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAPH1Q70E73 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAPH1Q70E73 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAPH1Q70E73 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
RAPH1Q70E73 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAPH1Q70E73 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.3■□□□□ 0.04
RAPH1Q70E73 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.3■□□□□ 0.04
RAPH1Q70E73 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RAPH1Q70E73 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAPH1Q70E73 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAPH1Q70E73 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.3■□□□□ 0.04
RAPH1Q70E73 CNN2P2-201ENST00000443536 909 ntBASIC15.3■□□□□ 0.04
RAPH1Q70E73 AP006288.1-201ENST00000446065 395 ntBASIC15.3■□□□□ 0.04
RAPH1Q70E73 CNN2P3-201ENST00000450201 906 ntBASIC15.3■□□□□ 0.04
RAPH1Q70E73 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.3■□□□□ 0.04
RAPH1Q70E73 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
RAPH1Q70E73 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.3■□□□□ 0.04
RAPH1Q70E73 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAPH1Q70E73 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.3■□□□□ 0.04
RAPH1Q70E73 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
RAPH1Q70E73 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.3■□□□□ 0.04
RAPH1Q70E73 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.3■□□□□ 0.04
RAPH1Q70E73 AC051619.7-201ENST00000568314 623 ntBASIC15.3■□□□□ 0.04
RAPH1Q70E73 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAPH1Q70E73 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.3■□□□□ 0.04
RAPH1Q70E73 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAPH1Q70E73 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.3■□□□□ 0.04
RAPH1Q70E73 AC027612.4-201ENST00000605371 583 ntBASIC15.3■□□□□ 0.04
RAPH1Q70E73 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RAPH1Q70E73 AL138828.2-201ENST00000615812 383 ntBASIC15.3■□□□□ 0.04
RAPH1Q70E73 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAPH1Q70E73 AL136317.3-201ENST00000618497 906 ntBASIC15.3■□□□□ 0.04
RAPH1Q70E73 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.3■□□□□ 0.04
RAPH1Q70E73 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.3■□□□□ 0.04
RAPH1Q70E73 AC134684.3-201ENST00000641758 218 ntBASIC15.3■□□□□ 0.04
RAPH1Q70E73 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
RAPH1Q70E73 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAPH1Q70E73 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
RAPH1Q70E73 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAPH1Q70E73 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAPH1Q70E73 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAPH1Q70E73 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAPH1Q70E73 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RAPH1Q70E73 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAPH1Q70E73 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
RAPH1Q70E73 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAPH1Q70E73 MTHFR-210ENST00000641407 2387 ntBASIC15.29■□□□□ 0.04
RAPH1Q70E73 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAPH1Q70E73 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAPH1Q70E73 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.29■□□□□ 0.04
RAPH1Q70E73 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.29■□□□□ 0.04
RAPH1Q70E73 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAPH1Q70E73 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms