Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 RARRES2P9-201ENST00000565168 469 ntBASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 SPDYE12P-201ENST00000618416 771 ntBASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 AC025048.6-201ENST00000634326 1161 ntBASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 AP3S2-216ENST00000617003 1561 ntBASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 AC022144.1-201ENST00000602255 1580 ntBASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 MRPS18AP1-201ENST00000414458 589 ntBASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 AC007274.1-201ENST00000439805 662 ntBASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 MTND6P24-201ENST00000440466 518 ntBASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 KRT18P34-201ENST00000488218 1270 ntBASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 AC020765.3-201ENST00000613051 740 ntBASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
FOXR1Q6PIV2 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms