Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 SPDYE9P-201ENST00000570642 692 ntBASIC13.34□□□□□ -0.27
C11orf88Q6PI97 MIR3909-201ENST00000579518 119 ntBASIC13.34□□□□□ -0.27
C11orf88Q6PI97 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 AC022145.2-201ENST00000598203 171 ntBASIC13.34□□□□□ -0.27
C11orf88Q6PI97 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 SPDYE10P-202ENST00000612005 668 ntBASIC13.34□□□□□ -0.27
C11orf88Q6PI97 SPDYE8P-202ENST00000612377 668 ntBASIC13.34□□□□□ -0.27
C11orf88Q6PI97 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
C11orf88Q6PI97 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
C11orf88Q6PI97 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.33□□□□□ -0.27
C11orf88Q6PI97 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
C11orf88Q6PI97 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.33□□□□□ -0.27
C11orf88Q6PI97 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.27
C11orf88Q6PI97 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.33□□□□□ -0.28
C11orf88Q6PI97 AC027601.5-201ENST00000624065 2482 ntBASIC13.33□□□□□ -0.28
C11orf88Q6PI97 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
C11orf88Q6PI97 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
C11orf88Q6PI97 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
C11orf88Q6PI97 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
C11orf88Q6PI97 AL355306.1-201ENST00000415580 579 ntBASIC13.33□□□□□ -0.28
C11orf88Q6PI97 AL671277.1-201ENST00000429656 993 ntBASIC13.33□□□□□ -0.28
C11orf88Q6PI97 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
C11orf88Q6PI97 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.33□□□□□ -0.28
C11orf88Q6PI97 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.33□□□□□ -0.28
C11orf88Q6PI97 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.33□□□□□ -0.28
C11orf88Q6PI97 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
C11orf88Q6PI97 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.33□□□□□ -0.28
C11orf88Q6PI97 AC015911.4-201ENST00000588022 1070 ntBASIC13.33□□□□□ -0.28
C11orf88Q6PI97 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
C11orf88Q6PI97 AC027612.4-201ENST00000605371 583 ntBASIC13.33□□□□□ -0.28
C11orf88Q6PI97 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.33□□□□□ -0.28
C11orf88Q6PI97 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
C11orf88Q6PI97 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.33□□□□□ -0.28
C11orf88Q6PI97 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
C11orf88Q6PI97 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
C11orf88Q6PI97 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.33□□□□□ -0.28
C11orf88Q6PI97 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
C11orf88Q6PI97 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
C11orf88Q6PI97 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
C11orf88Q6PI97 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
C11orf88Q6PI97 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.33□□□□□ -0.28
C11orf88Q6PI97 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.33□□□□□ -0.28
C11orf88Q6PI97 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
C11orf88Q6PI97 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
C11orf88Q6PI97 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.33□□□□□ -0.28
C11orf88Q6PI97 CICP20-201ENST00000443330 2801 ntBASIC13.33□□□□□ -0.28
C11orf88Q6PI97 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
C11orf88Q6PI97 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
C11orf88Q6PI97 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.33□□□□□ -0.28
C11orf88Q6PI97 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
C11orf88Q6PI97 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.33□□□□□ -0.28
C11orf88Q6PI97 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.33□□□□□ -0.28
C11orf88Q6PI97 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
C11orf88Q6PI97 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
C11orf88Q6PI97 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.32□□□□□ -0.28
C11orf88Q6PI97 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms