Protein–RNA interactions for Protein: Q6NT76

HMBOX1, Homeobox-containing protein 1, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1Q6NT76 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.41□□□□□ -0.1
HMBOX1Q6NT76 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMBOX1Q6NT76 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.41□□□□□ -0.1
HMBOX1Q6NT76 SLC25A39P2-201ENST00000537614 270 ntBASIC14.41□□□□□ -0.1
HMBOX1Q6NT76 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.41□□□□□ -0.1
HMBOX1Q6NT76 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.41□□□□□ -0.1
HMBOX1Q6NT76 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.41□□□□□ -0.1
HMBOX1Q6NT76 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.41□□□□□ -0.1
HMBOX1Q6NT76 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMBOX1Q6NT76 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HMBOX1Q6NT76 AC055811.4-201ENST00000624039 1754 ntBASIC14.41□□□□□ -0.1
HMBOX1Q6NT76 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMBOX1Q6NT76 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.41□□□□□ -0.1
HMBOX1Q6NT76 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMBOX1Q6NT76 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
HMBOX1Q6NT76 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HMBOX1Q6NT76 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMBOX1Q6NT76 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.41□□□□□ -0.1
HMBOX1Q6NT76 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMBOX1Q6NT76 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.41□□□□□ -0.1
HMBOX1Q6NT76 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMBOX1Q6NT76 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMBOX1Q6NT76 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMBOX1Q6NT76 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.41□□□□□ -0.1
HMBOX1Q6NT76 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMBOX1Q6NT76 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.41□□□□□ -0.1
HMBOX1Q6NT76 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMBOX1Q6NT76 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMBOX1Q6NT76 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 AC130686.1-201ENST00000622936 2466 ntBASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 HLA-H-201ENST00000383620 1096 ntBASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 AC142381.1-201ENST00000426099 345 ntBASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 AL139010.1-201ENST00000454878 894 ntBASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 TPT1P11-201ENST00000458482 498 ntBASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 RNA5SP410-201ENST00000516285 106 ntBASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 AC027612.4-201ENST00000605371 583 ntBASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMBOX1Q6NT76 AL122018.1-201ENST00000446607 2310 ntBASIC14.4□□□□□ -0.11
HMBOX1Q6NT76 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
HMBOX1Q6NT76 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMBOX1Q6NT76 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMBOX1Q6NT76 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMBOX1Q6NT76 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMBOX1Q6NT76 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMBOX1Q6NT76 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.39□□□□□ -0.11
HMBOX1Q6NT76 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.39□□□□□ -0.11
HMBOX1Q6NT76 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
HMBOX1Q6NT76 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.39□□□□□ -0.11
HMBOX1Q6NT76 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.39□□□□□ -0.11
HMBOX1Q6NT76 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMBOX1Q6NT76 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.39□□□□□ -0.11
HMBOX1Q6NT76 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMBOX1Q6NT76 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.39□□□□□ -0.11
HMBOX1Q6NT76 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMBOX1Q6NT76 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.39□□□□□ -0.11
HMBOX1Q6NT76 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMBOX1Q6NT76 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMBOX1Q6NT76 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HMBOX1Q6NT76 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HMBOX1Q6NT76 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMBOX1Q6NT76 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
HMBOX1Q6NT76 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMBOX1Q6NT76 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMBOX1Q6NT76 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMBOX1Q6NT76 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HMBOX1Q6NT76 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms