Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDKAL1Q5VV42 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.53■□□□□ 0.24
CDKAL1Q5VV42 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.53■□□□□ 0.24
CDKAL1Q5VV42 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDKAL1Q5VV42 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKAL1Q5VV42 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.53■□□□□ 0.24
CDKAL1Q5VV42 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.53■□□□□ 0.24
CDKAL1Q5VV42 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKAL1Q5VV42 AL390754.1-201ENST00000619088 582 ntBASIC16.53■□□□□ 0.24
CDKAL1Q5VV42 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKAL1Q5VV42 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.53■□□□□ 0.24
CDKAL1Q5VV42 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDKAL1Q5VV42 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDKAL1Q5VV42 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.53■□□□□ 0.24
CDKAL1Q5VV42 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKAL1Q5VV42 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.53■□□□□ 0.24
CDKAL1Q5VV42 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKAL1Q5VV42 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKAL1Q5VV42 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
CDKAL1Q5VV42 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKAL1Q5VV42 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKAL1Q5VV42 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDKAL1Q5VV42 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDKAL1Q5VV42 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDKAL1Q5VV42 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 MIR1233-2-201ENST00000408138 82 ntBASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 MIR1233-1-201ENST00000408722 82 ntBASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 AC055876.3-201ENST00000431496 288 ntBASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 AC026434.2-201ENST00000506094 1078 ntBASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 AC138649.4-201ENST00000612222 287 ntBASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 BX539320.1-201ENST00000623759 877 ntBASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 AL359881.3-201ENST00000602640 1721 ntBASIC16.52■□□□□ 0.24
CDKAL1Q5VV42 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDKAL1Q5VV42 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CDKAL1Q5VV42 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.52■□□□□ 0.23
CDKAL1Q5VV42 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC16.52■□□□□ 0.23
CDKAL1Q5VV42 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CDKAL1Q5VV42 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDKAL1Q5VV42 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDKAL1Q5VV42 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDKAL1Q5VV42 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.52■□□□□ 0.23
CDKAL1Q5VV42 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC16.52■□□□□ 0.23
CDKAL1Q5VV42 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CDKAL1Q5VV42 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDKAL1Q5VV42 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CDKAL1Q5VV42 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKAL1Q5VV42 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.51■□□□□ 0.23
CDKAL1Q5VV42 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDKAL1Q5VV42 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKAL1Q5VV42 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CDKAL1Q5VV42 MBLAC2-202ENST00000514906 1936 ntBASIC16.51■□□□□ 0.23
CDKAL1Q5VV42 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDKAL1Q5VV42 AC010327.5-201ENST00000586923 3061 ntBASIC16.51■□□□□ 0.23
CDKAL1Q5VV42 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKAL1Q5VV42 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDKAL1Q5VV42 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CDKAL1Q5VV42 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.51■□□□□ 0.23
CDKAL1Q5VV42 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.51■□□□□ 0.23
CDKAL1Q5VV42 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDKAL1Q5VV42 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKAL1Q5VV42 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.51■□□□□ 0.23
CDKAL1Q5VV42 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKAL1Q5VV42 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.51■□□□□ 0.23
CDKAL1Q5VV42 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.51■□□□□ 0.23
CDKAL1Q5VV42 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.51■□□□□ 0.23
CDKAL1Q5VV42 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.51■□□□□ 0.23
CDKAL1Q5VV42 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms