Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 OR7E14P-202ENST00000530490 1290 ntBASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC6LQ2NKX8 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 AL365181.3-201ENST00000605886 3222 ntBASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 AKR1C7P-201ENST00000305623 895 ntBASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 AL138918.1-201ENST00000568306 659 ntBASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 AL691432.3-201ENST00000621860 400 ntBASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ERCC6LQ2NKX8 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ERCC6LQ2NKX8 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
ERCC6LQ2NKX8 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ERCC6LQ2NKX8 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC16.08■□□□□ 0.17
ERCC6LQ2NKX8 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
ERCC6LQ2NKX8 AC004899.2-201ENST00000622993 3860 ntBASIC16.08■□□□□ 0.17
ERCC6LQ2NKX8 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ERCC6LQ2NKX8 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ERCC6LQ2NKX8 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC16.08■□□□□ 0.16
ERCC6LQ2NKX8 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ERCC6LQ2NKX8 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ERCC6LQ2NKX8 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ERCC6LQ2NKX8 AGGF1P1-201ENST00000509500 2073 ntBASIC16.08■□□□□ 0.16
ERCC6LQ2NKX8 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.08■□□□□ 0.16
ERCC6LQ2NKX8 AZGP1P1-201ENST00000411909 902 ntBASIC16.08■□□□□ 0.16
ERCC6LQ2NKX8 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.08■□□□□ 0.16
ERCC6LQ2NKX8 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.08■□□□□ 0.16
ERCC6LQ2NKX8 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.08■□□□□ 0.16
ERCC6LQ2NKX8 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.08■□□□□ 0.16
ERCC6LQ2NKX8 AC073389.1-201ENST00000595595 795 ntBASIC16.08■□□□□ 0.16
ERCC6LQ2NKX8 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.08■□□□□ 0.16
ERCC6LQ2NKX8 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.08■□□□□ 0.16
ERCC6LQ2NKX8 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
ERCC6LQ2NKX8 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms