Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 AP001582.1-201ENST00000525856 295 ntBASIC15.32■□□□□ 0.04
CDH17Q12864 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.32■□□□□ 0.04
CDH17Q12864 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.32■□□□□ 0.04
CDH17Q12864 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.32■□□□□ 0.04
CDH17Q12864 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDH17Q12864 TMEM261P1-201ENST00000604899 340 ntBASIC15.32■□□□□ 0.04
CDH17Q12864 AC008761.3-201ENST00000624803 892 ntBASIC15.32■□□□□ 0.04
CDH17Q12864 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CDH17Q12864 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
CDH17Q12864 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH17Q12864 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH17Q12864 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH17Q12864 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH17Q12864 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CDH17Q12864 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH17Q12864 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH17Q12864 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH17Q12864 AC018665.1-201ENST00000622927 1362 ntBASIC15.32■□□□□ 0.04
CDH17Q12864 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH17Q12864 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH17Q12864 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH17Q12864 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH17Q12864 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH17Q12864 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.32■□□□□ 0.04
CDH17Q12864 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH17Q12864 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH17Q12864 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH17Q12864 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH17Q12864 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
CDH17Q12864 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH17Q12864 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH17Q12864 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH17Q12864 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH17Q12864 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH17Q12864 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH17Q12864 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH17Q12864 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CDH17Q12864 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH17Q12864 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH17Q12864 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
CDH17Q12864 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH17Q12864 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH17Q12864 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH17Q12864 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH17Q12864 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CDH17Q12864 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH17Q12864 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CDH17Q12864 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.31■□□□□ 0.04
CDH17Q12864 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH17Q12864 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH17Q12864 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH17Q12864 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH17Q12864 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH17Q12864 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH17Q12864 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH17Q12864 AC098850.1-201ENST00000419919 790 ntBASIC15.31■□□□□ 0.04
CDH17Q12864 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.31■□□□□ 0.04
CDH17Q12864 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.31■□□□□ 0.04
CDH17Q12864 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.31■□□□□ 0.04
CDH17Q12864 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.31■□□□□ 0.04
CDH17Q12864 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.31■□□□□ 0.04
CDH17Q12864 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH17Q12864 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.31■□□□□ 0.04
CDH17Q12864 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.31■□□□□ 0.04
CDH17Q12864 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.31■□□□□ 0.04
CDH17Q12864 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.31■□□□□ 0.04
CDH17Q12864 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH17Q12864 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH17Q12864 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH17Q12864 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
CDH17Q12864 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH17Q12864 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH17Q12864 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH17Q12864 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH17Q12864 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CDH17Q12864 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.31■□□□□ 0.04
CDH17Q12864 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH17Q12864 AC113367.3-201ENST00000508316 1912 ntBASIC15.31■□□□□ 0.04
CDH17Q12864 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH17Q12864 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.31■□□□□ 0.04
CDH17Q12864 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH17Q12864 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH17Q12864 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.3■□□□□ 0.04
CDH17Q12864 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
CDH17Q12864 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH17Q12864 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CDH17Q12864 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH17Q12864 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH17Q12864 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH17Q12864 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH17Q12864 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH17Q12864 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH17Q12864 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH17Q12864 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH17Q12864 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH17Q12864 RNU1-114P-201ENST00000365297 166 ntBASIC15.3■□□□□ 0.04
CDH17Q12864 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.3■□□□□ 0.04
CDH17Q12864 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH17Q12864 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH17Q12864 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms