Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
KCNA1Q09470 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNA1Q09470 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
KCNA1Q09470 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.63■□□□□ 0.25
KCNA1Q09470 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.63■□□□□ 0.25
KCNA1Q09470 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNA1Q09470 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KCNA1Q09470 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNA1Q09470 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
KCNA1Q09470 AC092933.1-201ENST00000393644 945 ntBASIC16.63■□□□□ 0.25
KCNA1Q09470 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.63■□□□□ 0.25
KCNA1Q09470 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.63■□□□□ 0.25
KCNA1Q09470 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.63■□□□□ 0.25
KCNA1Q09470 LINC01922-201ENST00000562582 719 ntBASIC16.63■□□□□ 0.25
KCNA1Q09470 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
KCNA1Q09470 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
KCNA1Q09470 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
KCNA1Q09470 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNA1Q09470 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNA1Q09470 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNA1Q09470 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNA1Q09470 AC018442.1-201ENST00000421439 2061 ntBASIC16.63■□□□□ 0.25
KCNA1Q09470 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNA1Q09470 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNA1Q09470 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNA1Q09470 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNA1Q09470 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
KCNA1Q09470 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KCNA1Q09470 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.63■□□□□ 0.25
KCNA1Q09470 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.62■□□□□ 0.25
KCNA1Q09470 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
KCNA1Q09470 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
KCNA1Q09470 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.62■□□□□ 0.25
KCNA1Q09470 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
KCNA1Q09470 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KCNA1Q09470 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KCNA1Q09470 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.62■□□□□ 0.25
KCNA1Q09470 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KCNA1Q09470 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
KCNA1Q09470 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KCNA1Q09470 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
KCNA1Q09470 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KCNA1Q09470 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.62■□□□□ 0.25
KCNA1Q09470 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
KCNA1Q09470 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KCNA1Q09470 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.62■□□□□ 0.25
KCNA1Q09470 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KCNA1Q09470 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
KCNA1Q09470 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
KCNA1Q09470 CR383656.12-201ENST00000549567 513 ntBASIC16.62■□□□□ 0.25
KCNA1Q09470 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.62■□□□□ 0.25
KCNA1Q09470 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.62■□□□□ 0.25
KCNA1Q09470 BTNL10-201ENST00000595971 695 ntBASIC16.62■□□□□ 0.25
KCNA1Q09470 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.62■□□□□ 0.25
KCNA1Q09470 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.62■□□□□ 0.25
KCNA1Q09470 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KCNA1Q09470 LINC01101-201ENST00000622953 1884 ntBASIC16.62■□□□□ 0.25
KCNA1Q09470 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KCNA1Q09470 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
KCNA1Q09470 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
KCNA1Q09470 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
KCNA1Q09470 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KCNA1Q09470 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KCNA1Q09470 LINC00552-201ENST00000625151 2579 ntBASIC16.62■□□□□ 0.25
KCNA1Q09470 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
KCNA1Q09470 AC018665.1-201ENST00000622927 1362 ntBASIC16.62■□□□□ 0.25
KCNA1Q09470 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KCNA1Q09470 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KCNA1Q09470 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KCNA1Q09470 AC063926.3-201ENST00000624734 5658 ntBASIC16.61■□□□□ 0.25
KCNA1Q09470 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
KCNA1Q09470 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KCNA1Q09470 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.61■□□□□ 0.25
KCNA1Q09470 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
KCNA1Q09470 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.61■□□□□ 0.25
KCNA1Q09470 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
KCNA1Q09470 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
KCNA1Q09470 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KCNA1Q09470 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
KCNA1Q09470 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.61■□□□□ 0.25
KCNA1Q09470 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KCNA1Q09470 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.61■□□□□ 0.25
KCNA1Q09470 AC005229.1-201ENST00000392885 409 ntBASIC16.61■□□□□ 0.25
KCNA1Q09470 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
KCNA1Q09470 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
KCNA1Q09470 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.61■□□□□ 0.25
KCNA1Q09470 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.61■□□□□ 0.25
KCNA1Q09470 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KCNA1Q09470 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.61■□□□□ 0.25
KCNA1Q09470 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.61■□□□□ 0.25
KCNA1Q09470 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.61■□□□□ 0.25
KCNA1Q09470 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KCNA1Q09470 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.61■□□□□ 0.25
KCNA1Q09470 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.61■□□□□ 0.25
KCNA1Q09470 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KCNA1Q09470 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
KCNA1Q09470 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KCNA1Q09470 AC015936.2-201ENST00000593177 259 ntBASIC16.61■□□□□ 0.25
KCNA1Q09470 AC233724.13-201ENST00000598383 410 ntBASIC16.61■□□□□ 0.25
KCNA1Q09470 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms