Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 AP000358.1-201ENST00000456260 156 ntBASIC17.7■□□□□ 0.42
CNTNAP1P78357 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC17.7■□□□□ 0.42
CNTNAP1P78357 AC084752.1-201ENST00000509766 622 ntBASIC17.7■□□□□ 0.42
CNTNAP1P78357 CCNC-217ENST00000523985 958 ntTSL 2 BASIC17.7■□□□□ 0.42
CNTNAP1P78357 POLD4-208ENST00000532830 904 ntTSL 3 BASIC17.7■□□□□ 0.42
CNTNAP1P78357 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
CNTNAP1P78357 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.7■□□□□ 0.42
CNTNAP1P78357 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CNTNAP1P78357 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CNTNAP1P78357 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CNTNAP1P78357 AC008825.2-201ENST00000603374 718 ntBASIC17.7■□□□□ 0.42
CNTNAP1P78357 PTPN20CP-201ENST00000614090 920 ntBASIC17.7■□□□□ 0.42
CNTNAP1P78357 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC17.7■□□□□ 0.42
CNTNAP1P78357 AC002472.4-201ENST00000641915 272 ntBASIC17.7■□□□□ 0.42
CNTNAP1P78357 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNTNAP1P78357 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CNTNAP1P78357 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CNTNAP1P78357 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CNTNAP1P78357 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNTNAP1P78357 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
CNTNAP1P78357 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNTNAP1P78357 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNTNAP1P78357 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNTNAP1P78357 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.7■□□□□ 0.42
CNTNAP1P78357 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CNTNAP1P78357 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.7■□□□□ 0.42
CNTNAP1P78357 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CNTNAP1P78357 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
CNTNAP1P78357 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.7■□□□□ 0.42
CNTNAP1P78357 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CNTNAP1P78357 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNTNAP1P78357 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.69■□□□□ 0.42
CNTNAP1P78357 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP1P78357 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.69■□□□□ 0.42
CNTNAP1P78357 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP1P78357 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CNTNAP1P78357 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP1P78357 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CNTNAP1P78357 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CNTNAP1P78357 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP1P78357 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP1P78357 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP1P78357 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC17.69■□□□□ 0.42
CNTNAP1P78357 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.69■□□□□ 0.42
CNTNAP1P78357 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP1P78357 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC17.69■□□□□ 0.42
CNTNAP1P78357 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC17.69■□□□□ 0.42
CNTNAP1P78357 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC17.69■□□□□ 0.42
CNTNAP1P78357 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC17.69■□□□□ 0.42
CNTNAP1P78357 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CNTNAP1P78357 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.69■□□□□ 0.42
CNTNAP1P78357 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CNTNAP1P78357 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CNTNAP1P78357 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CNTNAP1P78357 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CNTNAP1P78357 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CNTNAP1P78357 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CNTNAP1P78357 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CNTNAP1P78357 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP1P78357 AL365203.3-201ENST00000609742 2057 ntBASIC17.69■□□□□ 0.42
CNTNAP1P78357 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP1P78357 AC026691.1-201ENST00000602502 2017 ntBASIC17.69■□□□□ 0.42
CNTNAP1P78357 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CNTNAP1P78357 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP1P78357 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP1P78357 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP1P78357 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP1P78357 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP1P78357 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CNTNAP1P78357 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP1P78357 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP1P78357 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP1P78357 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP1P78357 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP1P78357 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNTNAP1P78357 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.68■□□□□ 0.42
CNTNAP1P78357 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNTNAP1P78357 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.68■□□□□ 0.42
CNTNAP1P78357 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNTNAP1P78357 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNTNAP1P78357 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNTNAP1P78357 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNTNAP1P78357 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CNTNAP1P78357 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC17.68■□□□□ 0.42
CNTNAP1P78357 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC17.68■□□□□ 0.42
CNTNAP1P78357 AC092638.2-201ENST00000441105 947 ntBASIC17.68■□□□□ 0.42
CNTNAP1P78357 AC012441.2-201ENST00000444843 739 ntBASIC17.68■□□□□ 0.42
CNTNAP1P78357 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNTNAP1P78357 LINC00634-202ENST00000505157 222 ntBASIC17.68■□□□□ 0.42
CNTNAP1P78357 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC17.68■□□□□ 0.42
CNTNAP1P78357 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CNTNAP1P78357 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC17.68■□□□□ 0.42
CNTNAP1P78357 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
CNTNAP1P78357 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC17.68■□□□□ 0.42
CNTNAP1P78357 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.68■□□□□ 0.42
CNTNAP1P78357 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNTNAP1P78357 AC136759.1-202ENST00000530858 2194 ntBASIC17.68■□□□□ 0.42
CNTNAP1P78357 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.68■□□□□ 0.42
CNTNAP1P78357 AC023090.2-201ENST00000625182 2110 ntBASIC17.68■□□□□ 0.42
CNTNAP1P78357 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms