Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H3AP68431 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H3AP68431 AC018665.1-201ENST00000622927 1362 ntBASIC13.25□□□□□ -0.29
HIST1H3AP68431 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
HIST1H3AP68431 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H3AP68431 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
HIST1H3AP68431 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H3AP68431 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H3AP68431 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H3AP68431 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H3AP68431 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.25□□□□□ -0.29
HIST1H3AP68431 KLF2P2-201ENST00000416807 1039 ntBASIC13.25□□□□□ -0.29
HIST1H3AP68431 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.25□□□□□ -0.29
HIST1H3AP68431 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H3AP68431 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
HIST1H3AP68431 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.25□□□□□ -0.29
HIST1H3AP68431 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
HIST1H3AP68431 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H3AP68431 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.25□□□□□ -0.29
HIST1H3AP68431 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.25□□□□□ -0.29
HIST1H3AP68431 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.25□□□□□ -0.29
HIST1H3AP68431 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.25□□□□□ -0.29
HIST1H3AP68431 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.25□□□□□ -0.29
HIST1H3AP68431 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.25□□□□□ -0.29
HIST1H3AP68431 CTBP2P3-201ENST00000585629 1255 ntBASIC13.25□□□□□ -0.29
HIST1H3AP68431 AP005019.2-201ENST00000615104 511 ntBASIC13.25□□□□□ -0.29
HIST1H3AP68431 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.25□□□□□ -0.29
HIST1H3AP68431 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H3AP68431 AC140479.7-201ENST00000636301 2332 ntBASIC13.25□□□□□ -0.29
HIST1H3AP68431 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H3AP68431 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H3AP68431 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H3AP68431 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H3AP68431 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H3AP68431 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H3AP68431 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.25□□□□□ -0.29
HIST1H3AP68431 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H3AP68431 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST1H3AP68431 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
HIST1H3AP68431 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H3AP68431 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H3AP68431 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H3AP68431 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H3AP68431 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
HIST1H3AP68431 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
HIST1H3AP68431 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H3AP68431 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST1H3AP68431 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
HIST1H3AP68431 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.24□□□□□ -0.29
HIST1H3AP68431 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H3AP68431 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H3AP68431 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H3AP68431 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H3AP68431 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
HIST1H3AP68431 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H3AP68431 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
HIST1H3AP68431 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H3AP68431 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H3AP68431 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H3AP68431 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H3AP68431 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H3AP68431 AC236430.1-201ENST00000402231 743 ntBASIC13.24□□□□□ -0.29
HIST1H3AP68431 PIN1P1-201ENST00000412108 996 ntBASIC13.24□□□□□ -0.29
HIST1H3AP68431 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H3AP68431 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.24□□□□□ -0.29
HIST1H3AP68431 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
HIST1H3AP68431 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST1H3AP68431 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.24□□□□□ -0.29
HIST1H3AP68431 CLUHP6-201ENST00000580789 941 ntBASIC13.24□□□□□ -0.29
HIST1H3AP68431 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.24□□□□□ -0.29
HIST1H3AP68431 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.24□□□□□ -0.29
HIST1H3AP68431 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.24□□□□□ -0.29
HIST1H3AP68431 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H3AP68431 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H3AP68431 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H3AP68431 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST1H3AP68431 MTHFR-210ENST00000641407 2387 ntBASIC13.24□□□□□ -0.29
HIST1H3AP68431 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H3AP68431 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST1H3AP68431 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
HIST1H3AP68431 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.24□□□□□ -0.29
HIST1H3AP68431 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.24□□□□□ -0.29
HIST1H3AP68431 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
HIST1H3AP68431 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.24□□□□□ -0.29
HIST1H3AP68431 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H3AP68431 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H3AP68431 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H3AP68431 AC097376.2-205ENST00000610159 5334 ntBASIC13.24□□□□□ -0.29
HIST1H3AP68431 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.24□□□□□ -0.29
HIST1H3AP68431 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H3AP68431 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.24□□□□□ -0.29
HIST1H3AP68431 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
HIST1H3AP68431 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H3AP68431 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H3AP68431 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H3AP68431 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H3AP68431 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H3AP68431 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
HIST1H3AP68431 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H3AP68431 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms