Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB1AP62820 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
RAB1AP62820 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RAB1AP62820 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB1AP62820 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB1AP62820 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB1AP62820 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB1AP62820 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB1AP62820 AC138969.2-201ENST00000532739 9932 ntBASIC13.37□□□□□ -0.27
RAB1AP62820 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RAB1AP62820 REXO1L4P-201ENST00000605109 1937 ntBASIC13.37□□□□□ -0.27
RAB1AP62820 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB1AP62820 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RAB1AP62820 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB1AP62820 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
RAB1AP62820 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB1AP62820 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.37□□□□□ -0.27
RAB1AP62820 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB1AP62820 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB1AP62820 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB1AP62820 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
RAB1AP62820 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.37□□□□□ -0.27
RAB1AP62820 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB1AP62820 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB1AP62820 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB1AP62820 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB1AP62820 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
RAB1AP62820 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.37□□□□□ -0.27
RAB1AP62820 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.37□□□□□ -0.27
RAB1AP62820 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
RAB1AP62820 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.37□□□□□ -0.27
RAB1AP62820 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.37□□□□□ -0.27
RAB1AP62820 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB1AP62820 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
RAB1AP62820 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB1AP62820 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
RAB1AP62820 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.37□□□□□ -0.27
RAB1AP62820 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.37□□□□□ -0.27
RAB1AP62820 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.37□□□□□ -0.27
RAB1AP62820 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB1AP62820 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.37□□□□□ -0.27
RAB1AP62820 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB1AP62820 AC005252.2-201ENST00000624630 1141 ntBASIC13.37□□□□□ -0.27
RAB1AP62820 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB1AP62820 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB1AP62820 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB1AP62820 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
RAB1AP62820 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB1AP62820 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RAB1AP62820 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB1AP62820 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB1AP62820 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RAB1AP62820 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RAB1AP62820 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RAB1AP62820 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB1AP62820 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB1AP62820 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB1AP62820 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB1AP62820 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.36□□□□□ -0.27
RAB1AP62820 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.36□□□□□ -0.27
RAB1AP62820 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB1AP62820 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.36□□□□□ -0.27
RAB1AP62820 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.36□□□□□ -0.27
RAB1AP62820 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB1AP62820 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB1AP62820 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
RAB1AP62820 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB1AP62820 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
RAB1AP62820 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB1AP62820 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB1AP62820 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB1AP62820 AP000845.1-201ENST00000581677 2131 ntBASIC13.36□□□□□ -0.27
RAB1AP62820 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.36□□□□□ -0.27
RAB1AP62820 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB1AP62820 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RAB1AP62820 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB1AP62820 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB1AP62820 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
RAB1AP62820 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB1AP62820 ACKR1-201ENST00000368121 1240 ntBASIC13.36□□□□□ -0.27
RAB1AP62820 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RAB1AP62820 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.36□□□□□ -0.27
RAB1AP62820 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB1AP62820 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RAB1AP62820 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.36□□□□□ -0.27
RAB1AP62820 RN7SL837P-201ENST00000463010 287 ntBASIC13.36□□□□□ -0.27
RAB1AP62820 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.36□□□□□ -0.27
RAB1AP62820 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
RAB1AP62820 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.36□□□□□ -0.27
RAB1AP62820 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.36□□□□□ -0.27
RAB1AP62820 AC009486.1-201ENST00000569860 813 ntBASIC13.36□□□□□ -0.27
RAB1AP62820 CLUHP6-201ENST00000580789 941 ntBASIC13.36□□□□□ -0.27
RAB1AP62820 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
RAB1AP62820 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
RAB1AP62820 AC010319.3-201ENST00000597028 470 ntBASIC13.36□□□□□ -0.27
RAB1AP62820 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.36□□□□□ -0.27
RAB1AP62820 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.36□□□□□ -0.27
RAB1AP62820 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB1AP62820 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB1AP62820 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms