Protein–RNA interactions for Protein: P61018

RAB4B, Ras-related protein Rab-4B, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4BP61018 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4BP61018 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC11.91□□□□□ -0.5
RAB4BP61018 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
RAB4BP61018 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4BP61018 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC11.91□□□□□ -0.5
RAB4BP61018 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4BP61018 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC11.91□□□□□ -0.5
RAB4BP61018 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4BP61018 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4BP61018 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC11.91□□□□□ -0.5
RAB4BP61018 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4BP61018 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4BP61018 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4BP61018 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4BP61018 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4BP61018 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4BP61018 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
RAB4BP61018 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC11.91□□□□□ -0.5
RAB4BP61018 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4BP61018 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
RAB4BP61018 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC11.91□□□□□ -0.5
RAB4BP61018 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC11.91□□□□□ -0.5
RAB4BP61018 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC11.91□□□□□ -0.5
RAB4BP61018 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4BP61018 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4BP61018 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4BP61018 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC11.91□□□□□ -0.5
RAB4BP61018 AC138894.3-201ENST00000603787 634 ntBASIC11.91□□□□□ -0.5
RAB4BP61018 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4BP61018 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC11.91□□□□□ -0.5
RAB4BP61018 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4BP61018 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4BP61018 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4BP61018 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC11.91□□□□□ -0.5
RAB4BP61018 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4BP61018 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC11.91□□□□□ -0.5
RAB4BP61018 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4BP61018 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC11.91□□□□□ -0.5
RAB4BP61018 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4BP61018 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4BP61018 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4BP61018 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC11.91□□□□□ -0.5
RAB4BP61018 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4BP61018 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4BP61018 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4BP61018 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4BP61018 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4BP61018 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC11.91□□□□□ -0.5
RAB4BP61018 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4BP61018 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4BP61018 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC11.91□□□□□ -0.5
RAB4BP61018 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
RAB4BP61018 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4BP61018 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC11.91□□□□□ -0.5
RAB4BP61018 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4BP61018 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4BP61018 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
RAB4BP61018 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4BP61018 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
RAB4BP61018 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4BP61018 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4BP61018 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4BP61018 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4BP61018 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4BP61018 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC11.9□□□□□ -0.5
RAB4BP61018 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4BP61018 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4BP61018 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4BP61018 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC11.9□□□□□ -0.5
RAB4BP61018 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC11.9□□□□□ -0.5
RAB4BP61018 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4BP61018 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
RAB4BP61018 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
RAB4BP61018 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4BP61018 LSS-211ENST00000522411 2523 ntTSL 2 BASIC11.9□□□□□ -0.5
RAB4BP61018 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
RAB4BP61018 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4BP61018 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4BP61018 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4BP61018 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4BP61018 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4BP61018 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC11.9□□□□□ -0.5
RAB4BP61018 NME2-201ENST00000393183 568 ntTSL 2 BASIC11.9□□□□□ -0.5
RAB4BP61018 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4BP61018 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC11.9□□□□□ -0.5
RAB4BP61018 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC11.9□□□□□ -0.5
RAB4BP61018 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC11.9□□□□□ -0.5
RAB4BP61018 AC087163.2-201ENST00000457299 853 ntBASIC11.9□□□□□ -0.5
RAB4BP61018 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC11.9□□□□□ -0.5
RAB4BP61018 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC11.9□□□□□ -0.5
RAB4BP61018 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC11.9□□□□□ -0.5
RAB4BP61018 IGHV3OR16-7-201ENST00000604106 360 ntBASIC11.9□□□□□ -0.5
RAB4BP61018 AC091076.1-201ENST00000610741 619 ntBASIC11.9□□□□□ -0.5
RAB4BP61018 AC092119.3-201ENST00000612618 583 ntBASIC11.9□□□□□ -0.5
RAB4BP61018 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC11.9□□□□□ -0.5
RAB4BP61018 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
RAB4BP61018 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC11.9□□□□□ -0.5
RAB4BP61018 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4BP61018 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4BP61018 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms