Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.81□□□□□ -0.2
HMGA2P52926 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
HMGA2P52926 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
HMGA2P52926 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HMGA2P52926 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.81□□□□□ -0.2
HMGA2P52926 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.81□□□□□ -0.2
HMGA2P52926 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.81□□□□□ -0.2
HMGA2P52926 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HMGA2P52926 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
HMGA2P52926 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
HMGA2P52926 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
HMGA2P52926 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HMGA2P52926 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HMGA2P52926 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HMGA2P52926 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.81□□□□□ -0.2
HMGA2P52926 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
HMGA2P52926 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.8□□□□□ -0.2
HMGA2P52926 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGA2P52926 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.8□□□□□ -0.2
HMGA2P52926 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HMGA2P52926 OR2I1P-209ENST00000641730 5365 ntBASIC13.8□□□□□ -0.2
HMGA2P52926 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGA2P52926 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGA2P52926 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
HMGA2P52926 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGA2P52926 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HMGA2P52926 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGA2P52926 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HMGA2P52926 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HMGA2P52926 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.8□□□□□ -0.2
HMGA2P52926 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGA2P52926 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
HMGA2P52926 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGA2P52926 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HMGA2P52926 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.8□□□□□ -0.2
HMGA2P52926 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
HMGA2P52926 AL022342.1-201ENST00000400363 863 ntBASIC13.8□□□□□ -0.2
HMGA2P52926 RPSAP43-201ENST00000402237 625 ntBASIC13.8□□□□□ -0.2
HMGA2P52926 AC254562.1-201ENST00000417586 456 ntBASIC13.8□□□□□ -0.2
HMGA2P52926 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.8□□□□□ -0.2
HMGA2P52926 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.8□□□□□ -0.2
HMGA2P52926 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.8□□□□□ -0.2
HMGA2P52926 AL844908.2-201ENST00000609461 460 ntBASIC13.8□□□□□ -0.2
HMGA2P52926 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.8□□□□□ -0.2
HMGA2P52926 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.8□□□□□ -0.2
HMGA2P52926 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGA2P52926 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGA2P52926 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.8□□□□□ -0.2
HMGA2P52926 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGA2P52926 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGA2P52926 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HMGA2P52926 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
HMGA2P52926 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.8□□□□□ -0.2
HMGA2P52926 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HMGA2P52926 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.8□□□□□ -0.2
HMGA2P52926 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGA2P52926 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGA2P52926 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
HMGA2P52926 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGA2P52926 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGA2P52926 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGA2P52926 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.8□□□□□ -0.2
HMGA2P52926 AC015818.8-201ENST00000587907 1519 ntBASIC13.8□□□□□ -0.2
HMGA2P52926 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
HMGA2P52926 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
HMGA2P52926 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
HMGA2P52926 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMGA2P52926 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.79□□□□□ -0.2
HMGA2P52926 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.79□□□□□ -0.2
HMGA2P52926 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMGA2P52926 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMGA2P52926 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMGA2P52926 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HMGA2P52926 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMGA2P52926 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMGA2P52926 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HMGA2P52926 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMGA2P52926 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMGA2P52926 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMGA2P52926 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HMGA2P52926 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMGA2P52926 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
HMGA2P52926 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HMGA2P52926 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMGA2P52926 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMGA2P52926 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HMGA2P52926 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
HMGA2P52926 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.79□□□□□ -0.2
HMGA2P52926 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
HMGA2P52926 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
HMGA2P52926 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.79□□□□□ -0.2
HMGA2P52926 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.79□□□□□ -0.2
HMGA2P52926 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HMGA2P52926 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.79□□□□□ -0.2
HMGA2P52926 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.79□□□□□ -0.2
HMGA2P52926 AC092364.2-202ENST00000597012 1073 ntBASIC13.79□□□□□ -0.2
HMGA2P52926 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.79□□□□□ -0.2
HMGA2P52926 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.79□□□□□ -0.2
HMGA2P52926 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMGA2P52926 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms