Protein–RNA interactions for Protein: P42338

PIK3CB, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform, humanhuman

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3CBP42338 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.59□□□□□ -0.07
PIK3CBP42338 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PIK3CBP42338 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.59□□□□□ -0.07
PIK3CBP42338 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PIK3CBP42338 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PIK3CBP42338 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PIK3CBP42338 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
PIK3CBP42338 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
PIK3CBP42338 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.58□□□□□ -0.07
PIK3CBP42338 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PIK3CBP42338 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PIK3CBP42338 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.58□□□□□ -0.08
PIK3CBP42338 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PIK3CBP42338 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.58□□□□□ -0.08
PIK3CBP42338 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
PIK3CBP42338 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PIK3CBP42338 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PIK3CBP42338 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PIK3CBP42338 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PIK3CBP42338 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PIK3CBP42338 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PIK3CBP42338 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PIK3CBP42338 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.58□□□□□ -0.08
PIK3CBP42338 AC236430.1-201ENST00000402231 743 ntBASIC14.58□□□□□ -0.08
PIK3CBP42338 AL139094.1-201ENST00000405549 1188 ntBASIC14.58□□□□□ -0.08
PIK3CBP42338 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.58□□□□□ -0.08
PIK3CBP42338 AC114812.1-204ENST00000449669 728 ntBASIC14.58□□□□□ -0.08
PIK3CBP42338 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.58□□□□□ -0.08
PIK3CBP42338 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PIK3CBP42338 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PIK3CBP42338 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.58□□□□□ -0.08
PIK3CBP42338 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.58□□□□□ -0.08
PIK3CBP42338 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.58□□□□□ -0.08
PIK3CBP42338 MIR4745-201ENST00000577608 62 ntBASIC14.58□□□□□ -0.08
PIK3CBP42338 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.58□□□□□ -0.08
PIK3CBP42338 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.58□□□□□ -0.08
PIK3CBP42338 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
PIK3CBP42338 AL603764.1-201ENST00000636452 321 ntBASIC14.58□□□□□ -0.08
PIK3CBP42338 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PIK3CBP42338 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PIK3CBP42338 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.58□□□□□ -0.08
PIK3CBP42338 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PIK3CBP42338 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.58□□□□□ -0.08
PIK3CBP42338 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PIK3CBP42338 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PIK3CBP42338 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.58□□□□□ -0.08
PIK3CBP42338 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
PIK3CBP42338 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.58□□□□□ -0.08
PIK3CBP42338 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PIK3CBP42338 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
PIK3CBP42338 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PIK3CBP42338 KRT8P14-201ENST00000414254 1442 ntBASIC14.58□□□□□ -0.08
PIK3CBP42338 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PIK3CBP42338 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PIK3CBP42338 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PIK3CBP42338 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PIK3CBP42338 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PIK3CBP42338 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
PIK3CBP42338 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PIK3CBP42338 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
PIK3CBP42338 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
PIK3CBP42338 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
PIK3CBP42338 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PIK3CBP42338 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PIK3CBP42338 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PIK3CBP42338 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PIK3CBP42338 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PIK3CBP42338 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PIK3CBP42338 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PIK3CBP42338 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PIK3CBP42338 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PIK3CBP42338 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.57□□□□□ -0.08
PIK3CBP42338 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.57□□□□□ -0.08
PIK3CBP42338 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PIK3CBP42338 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PIK3CBP42338 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PIK3CBP42338 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
PIK3CBP42338 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PIK3CBP42338 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PIK3CBP42338 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PIK3CBP42338 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PIK3CBP42338 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
PIK3CBP42338 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.57□□□□□ -0.08
PIK3CBP42338 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PIK3CBP42338 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.57□□□□□ -0.08
PIK3CBP42338 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.57□□□□□ -0.08
PIK3CBP42338 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.57□□□□□ -0.08
PIK3CBP42338 ELK1P1-201ENST00000485699 580 ntBASIC14.57□□□□□ -0.08
PIK3CBP42338 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.57□□□□□ -0.08
PIK3CBP42338 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.57□□□□□ -0.08
PIK3CBP42338 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.57□□□□□ -0.08
PIK3CBP42338 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.57□□□□□ -0.08
PIK3CBP42338 SPDYE22P-201ENST00000582158 798 ntBASIC14.57□□□□□ -0.08
PIK3CBP42338 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.57□□□□□ -0.08
PIK3CBP42338 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PIK3CBP42338 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.57□□□□□ -0.08
PIK3CBP42338 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PIK3CBP42338 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.57□□□□□ -0.08
PIK3CBP42338 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PIK3CBP42338 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms